Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 CCDC92B-201ENST00000575506 885 ntBASIC26.61■■□□□ 1.85
PDS5AQ29RF7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 LINC02228-203ENST00000641970 1355 ntBASIC26.6■■□□□ 1.85
PDS5AQ29RF7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.6■■□□□ 1.85
PDS5AQ29RF7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDS5AQ29RF7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.59■■□□□ 1.85
PDS5AQ29RF7 TPRG1LP1-201ENST00000598702 760 ntBASIC26.59■■□□□ 1.85
PDS5AQ29RF7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PDS5AQ29RF7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.59■■□□□ 1.85
PDS5AQ29RF7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.59■■□□□ 1.85
PDS5AQ29RF7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PDS5AQ29RF7 DUSP8P3-201ENST00000399571 1760 ntBASIC26.58■■□□□ 1.85
PDS5AQ29RF7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.58■■□□□ 1.85
PDS5AQ29RF7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.58■■□□□ 1.85
PDS5AQ29RF7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.58■■□□□ 1.85
PDS5AQ29RF7 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.58■■□□□ 1.85
PDS5AQ29RF7 KRT18P5-201ENST00000436075 1291 ntBASIC26.58■■□□□ 1.85
PDS5AQ29RF7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.58■■□□□ 1.85
PDS5AQ29RF7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PDS5AQ29RF7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
PDS5AQ29RF7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.58■■□□□ 1.84
PDS5AQ29RF7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PDS5AQ29RF7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDS5AQ29RF7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDS5AQ29RF7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDS5AQ29RF7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDS5AQ29RF7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PDS5AQ29RF7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDS5AQ29RF7 OXCT2P1-201ENST00000447263 1535 ntBASIC26.56■■□□□ 1.84
PDS5AQ29RF7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 SMUG1P1-201ENST00000590640 811 ntBASIC26.55■■□□□ 1.84
PDS5AQ29RF7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDS5AQ29RF7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDS5AQ29RF7 KRT18P14-201ENST00000534205 1250 ntBASIC26.54■■□□□ 1.84
PDS5AQ29RF7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDS5AQ29RF7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
PDS5AQ29RF7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDS5AQ29RF7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDS5AQ29RF7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
PDS5AQ29RF7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
PDS5AQ29RF7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms