Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 CLF1YLR117C 2064 nt5.06□□□□□ -1.6
BRE1Q07457 RRP14YKL082C 1305 nt5.06□□□□□ -1.6
BRE1Q07457 SRO9YCL037C 1305 nt5.06□□□□□ -1.6
BRE1Q07457 CYM1YDR430C 2970 nt5.06□□□□□ -1.6
BRE1Q07457 HPR1YDR138W 2259 nt5.06□□□□□ -1.6
BRE1Q07457 MDR1YGR100W 2853 nt5.06□□□□□ -1.6
BRE1Q07457 RXT3YDL076C 885 nt5.06□□□□□ -1.6
BRE1Q07457 SPI1YER150W 447 nt5.06□□□□□ -1.6
BRE1Q07457 YGL132WYGL132W 336 nt5.06□□□□□ -1.6
BRE1Q07457 CNB1YKL190W 528 nt5.06□□□□□ -1.6
BRE1Q07457 TFA2YKR062W 987 nt5.06□□□□□ -1.6
BRE1Q07457 YLR407WYLR407W 687 nt5.06□□□□□ -1.6
BRE1Q07457 YGK3YOL128C 1128 nt5.06□□□□□ -1.6
BRE1Q07457 CDC21YOR074C 915 nt5.06□□□□□ -1.6
BRE1Q07457 OSH2YDL019C 3852 nt5.06□□□□□ -1.6
BRE1Q07457 BUD13YGL174W 801 nt5.05□□□□□ -1.6
BRE1Q07457 YGL258W-AYGL258W-A 234 nt5.05□□□□□ -1.6
BRE1Q07457 MRPS35YGR165W 1038 nt5.05□□□□□ -1.6
BRE1Q07457 PIR3YKL163W 978 nt5.05□□□□□ -1.6
BRE1Q07457 CDC42YLR229C 576 nt5.05□□□□□ -1.6
BRE1Q07457 NIT3YLR351C 876 nt5.05□□□□□ -1.6
BRE1Q07457 CPR3YML078W 549 nt5.05□□□□□ -1.6
BRE1Q07457 YMR084WYMR084W 789 nt5.05□□□□□ -1.6
BRE1Q07457 RPL15BYMR121C 615 nt5.05□□□□□ -1.6
BRE1Q07457 SUA7YPR086W 1038 nt5.05□□□□□ -1.6
BRE1Q07457 APP1YNL094W 1764 nt5.05□□□□□ -1.6
BRE1Q07457 FLO8YER109C 2400 nt5.04□□□□□ -1.6
BRE1Q07457 KAR5YMR065W 1515 nt5.04□□□□□ -1.6
BRE1Q07457 YDR056CYDR056C 618 nt5.04□□□□□ -1.6
BRE1Q07457 TEX1YNL253W 1269 nt5.04□□□□□ -1.6
BRE1Q07457 DSC2YOL073C 969 nt5.04□□□□□ -1.6
BRE1Q07457 YAR1YPL239W 603 nt5.04□□□□□ -1.6
BRE1Q07457 PEP5YMR231W 3090 nt5.03□□□□□ -1.6
BRE1Q07457 RIT1YMR283C 1542 nt5.03□□□□□ -1.6
BRE1Q07457 MSS2YDL107W 1056 nt5.03□□□□□ -1.6
BRE1Q07457 AIM6YDL237W 1173 nt5.03□□□□□ -1.6
BRE1Q07457 TAF10YDR167W 621 nt5.03□□□□□ -1.6
BRE1Q07457 KRE28YDR532C 1158 nt5.03□□□□□ -1.6
BRE1Q07457 KEG1YFR042W 603 nt5.03□□□□□ -1.6
BRE1Q07457 SDT1YGL224C 843 nt5.03□□□□□ -1.6
BRE1Q07457 YLR345WYLR345W 1530 nt5.02□□□□□ -1.61
BRE1Q07457 YOL075CYOL075C 3885 nt5.02□□□□□ -1.61
BRE1Q07457 RAD54YGL163C 2697 nt5.02□□□□□ -1.61
BRE1Q07457 GLO3YER122C 1482 nt5.02□□□□□ -1.61
BRE1Q07457 PCL2YDL127W 927 nt5.02□□□□□ -1.61
BRE1Q07457 RPC53YDL150W 1269 nt5.02□□□□□ -1.61
BRE1Q07457 YPT53YNL093W 663 nt5.02□□□□□ -1.61
BRE1Q07457 MED7YOL135C 669 nt5.02□□□□□ -1.61
BRE1Q07457 RPN8YOR261C 1017 nt5.02□□□□□ -1.61
BRE1Q07457 AME1YBR211C 975 nt5.02□□□□□ -1.61
BRE1Q07457 GRX1YCL035C 333 nt5.02□□□□□ -1.61
BRE1Q07457 TED1YIL039W 1422 nt5.02□□□□□ -1.61
BRE1Q07457 ROK1YGL171W 1695 nt5.02□□□□□ -1.61
BRE1Q07457 VAC17YCL063W 1272 nt5.01□□□□□ -1.61
BRE1Q07457 RRG1YDR065W 1098 nt5.01□□□□□ -1.61
BRE1Q07457 BNA6YFR047C 888 nt5.01□□□□□ -1.61
BRE1Q07457 COX4YGL187C 468 nt5.01□□□□□ -1.61
BRE1Q07457 CLC1YGR167W 702 nt5.01□□□□□ -1.61
BRE1Q07457 YHL049CYHL049C 816 nt5.01□□□□□ -1.61
BRE1Q07457 RAD27YKL113C 1149 nt5.01□□□□□ -1.61
BRE1Q07457 EBP2YKL172W 1284 nt5.01□□□□□ -1.61
BRE1Q07457 CDC73YLR418C 1182 nt5.01□□□□□ -1.61
BRE1Q07457 YML031C-AYML031C-A 336 nt5.01□□□□□ -1.61
BRE1Q07457 IAH1YOR126C 717 nt5.01□□□□□ -1.61
BRE1Q07457 RRI1YDL216C 1323 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)CtQ(UUG)C 72 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)D1tQ(UUG)D1 72 nt5□□□□□ -1.61
BRE1Q07457 YHB1YGR234W 1200 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)D2tQ(UUG)D2 72 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)D3tQ(UUG)D3 72 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)E1tQ(UUG)E1 72 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)HtQ(UUG)H 72 nt5□□□□□ -1.61
BRE1Q07457 tQ(UUG)LtQ(UUG)L 72 nt5□□□□□ -1.61
BRE1Q07457 YKL177WYKL177W 339 nt5□□□□□ -1.61
BRE1Q07457 YAR030CYAR030C 342 nt5□□□□□ -1.61
BRE1Q07457 RTK1YDL025C 1863 nt5□□□□□ -1.61
BRE1Q07457 FRT2YAL028W 1587 nt4.99□□□□□ -1.61
BRE1Q07457 CMK1YFR014C 1341 nt4.99□□□□□ -1.61
BRE1Q07457 PRP28YDR243C 1767 nt4.99□□□□□ -1.61
BRE1Q07457 SPS2YDR522C 1509 nt4.99□□□□□ -1.61
BRE1Q07457 YCL075WYCL075W 441 nt4.99□□□□□ -1.61
BRE1Q07457 API2YDR525W 330 nt4.99□□□□□ -1.61
BRE1Q07457 SPO73YER046W 432 nt4.99□□□□□ -1.61
BRE1Q07457 DDI2YFL061W 678 nt4.99□□□□□ -1.61
BRE1Q07457 NPY1YGL067W 1155 nt4.99□□□□□ -1.61
BRE1Q07457 YGL188CYGL188C 174 nt4.99□□□□□ -1.61
BRE1Q07457 COS12YGL263W 1143 nt4.99□□□□□ -1.61
BRE1Q07457 PPE1YHR075C 1203 nt4.99□□□□□ -1.61
BRE1Q07457 YIL171WYIL171W 330 nt4.99□□□□□ -1.61
BRE1Q07457 ELF1YKL160W 438 nt4.99□□□□□ -1.61
BRE1Q07457 PAM18YLR008C 507 nt4.99□□□□□ -1.61
BRE1Q07457 YLR157W-DYLR157W-D 213 nt4.99□□□□□ -1.61
BRE1Q07457 YBL010CYBL010C 843 nt4.99□□□□□ -1.61
BRE1Q07457 RSF1YMR030W 1131 nt4.99□□□□□ -1.61
BRE1Q07457 ERD2YBL040C 660 nt4.99□□□□□ -1.61
BRE1Q07457 DDI3YNL335W 678 nt4.99□□□□□ -1.61
BRE1Q07457 snR19snR19 568 nt4.99□□□□□ -1.61
BRE1Q07457 SHE3YBR130C 1278 nt4.99□□□□□ -1.61
BRE1Q07457 KAP114YGL241W 3015 nt4.99□□□□□ -1.61
BRE1Q07457 TRM11YOL124C 1302 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms