Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFHR3Q02985 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CFHR3Q02985 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CFHR3Q02985 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CFHR3Q02985 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.19■□□□□ 0.34
CFHR3Q02985 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.19■□□□□ 0.34
CFHR3Q02985 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.19■□□□□ 0.34
CFHR3Q02985 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.19■□□□□ 0.34
CFHR3Q02985 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.19■□□□□ 0.34
CFHR3Q02985 AC068587.7-201ENST00000641602 218 ntBASIC17.19■□□□□ 0.34
CFHR3Q02985 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CFHR3Q02985 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CFHR3Q02985 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CFHR3Q02985 TSPY26P-201ENST00000476365 1326 ntBASIC17.19■□□□□ 0.34
CFHR3Q02985 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.19■□□□□ 0.34
CFHR3Q02985 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CFHR3Q02985 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CFHR3Q02985 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CFHR3Q02985 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.18■□□□□ 0.34
CFHR3Q02985 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.18■□□□□ 0.34
CFHR3Q02985 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CFHR3Q02985 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.18■□□□□ 0.34
CFHR3Q02985 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.18■□□□□ 0.34
CFHR3Q02985 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CFHR3Q02985 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.18■□□□□ 0.34
CFHR3Q02985 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.18■□□□□ 0.34
CFHR3Q02985 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.18■□□□□ 0.34
CFHR3Q02985 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.17■□□□□ 0.34
CFHR3Q02985 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.17■□□□□ 0.34
CFHR3Q02985 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.17■□□□□ 0.34
CFHR3Q02985 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
CFHR3Q02985 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.17■□□□□ 0.34
CFHR3Q02985 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFHR3Q02985 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.16■□□□□ 0.34
CFHR3Q02985 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
CFHR3Q02985 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.16■□□□□ 0.34
CFHR3Q02985 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CFHR3Q02985 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CFHR3Q02985 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.16■□□□□ 0.34
CFHR3Q02985 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.16■□□□□ 0.34
CFHR3Q02985 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CFHR3Q02985 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFHR3Q02985 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CFHR3Q02985 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CFHR3Q02985 IRS3P-201ENST00000223076 1006 ntBASIC17.15■□□□□ 0.34
CFHR3Q02985 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFHR3Q02985 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.15■□□□□ 0.34
CFHR3Q02985 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFHR3Q02985 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFHR3Q02985 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.15■□□□□ 0.34
CFHR3Q02985 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.15■□□□□ 0.34
CFHR3Q02985 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.15■□□□□ 0.34
CFHR3Q02985 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CFHR3Q02985 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CFHR3Q02985 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.14■□□□□ 0.33
CFHR3Q02985 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.14■□□□□ 0.33
CFHR3Q02985 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CFHR3Q02985 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.14■□□□□ 0.33
CFHR3Q02985 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.14■□□□□ 0.33
CFHR3Q02985 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.14■□□□□ 0.33
CFHR3Q02985 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.14■□□□□ 0.33
CFHR3Q02985 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFHR3Q02985 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms