Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SRPXP78539 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRPXP78539 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
SRPXP78539 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.08■□□□□ 0.49
SRPXP78539 AC026310.3-201ENST00000625186 2373 ntBASIC18.08■□□□□ 0.48
SRPXP78539 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SRPXP78539 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.08■□□□□ 0.48
SRPXP78539 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.08■□□□□ 0.48
SRPXP78539 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRPXP78539 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SRPXP78539 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.07■□□□□ 0.48
SRPXP78539 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SRPXP78539 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.07■□□□□ 0.48
SRPXP78539 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.07■□□□□ 0.48
SRPXP78539 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.07■□□□□ 0.48
SRPXP78539 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.07■□□□□ 0.48
SRPXP78539 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRPXP78539 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.07■□□□□ 0.48
SRPXP78539 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SRPXP78539 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SRPXP78539 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SRPXP78539 FAM99A-202ENST00000538190 1989 ntBASIC18.06■□□□□ 0.48
SRPXP78539 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.06■□□□□ 0.48
SRPXP78539 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.06■□□□□ 0.48
SRPXP78539 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.06■□□□□ 0.48
SRPXP78539 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.06■□□□□ 0.48
SRPXP78539 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRPXP78539 AC010542.4-201ENST00000563151 1910 ntBASIC18.06■□□□□ 0.48
SRPXP78539 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.05■□□□□ 0.48
SRPXP78539 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SRPXP78539 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.05■□□□□ 0.48
SRPXP78539 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.05■□□□□ 0.48
SRPXP78539 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SRPXP78539 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.05■□□□□ 0.48
SRPXP78539 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SRPXP78539 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.05■□□□□ 0.48
SRPXP78539 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.05■□□□□ 0.48
SRPXP78539 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPXP78539 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRPXP78539 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.04■□□□□ 0.48
SRPXP78539 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SRPXP78539 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPXP78539 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPXP78539 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.04■□□□□ 0.48
SRPXP78539 MIR4449-201ENST00000578365 66 ntBASIC18.04■□□□□ 0.48
SRPXP78539 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPXP78539 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPXP78539 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPXP78539 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.03■□□□□ 0.48
SRPXP78539 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPXP78539 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SRPXP78539 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPXP78539 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.03■□□□□ 0.48
SRPXP78539 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.03■□□□□ 0.48
SRPXP78539 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPXP78539 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPXP78539 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPXP78539 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.03■□□□□ 0.48
SRPXP78539 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.03■□□□□ 0.48
SRPXP78539 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.03■□□□□ 0.48
SRPXP78539 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms