Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
NKX6-1P78426 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NKX6-1P78426 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-1P78426 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-1P78426 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-1P78426 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-1P78426 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NKX6-1P78426 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.25■□□□□ 0.67
NKX6-1P78426 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX6-1P78426 AC126544.1-201ENST00000580842 1059 ntBASIC19.25■□□□□ 0.67
NKX6-1P78426 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NKX6-1P78426 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NKX6-1P78426 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX6-1P78426 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.24■□□□□ 0.67
NKX6-1P78426 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 YBX1P1-201ENST00000445822 960 ntBASIC19.24■□□□□ 0.67
NKX6-1P78426 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 pRNA.6-201ENST00000610482 90 ntBASIC19.24■□□□□ 0.67
NKX6-1P78426 pRNA.5-201ENST00000612139 90 ntBASIC19.24■□□□□ 0.67
NKX6-1P78426 pRNA.11-201ENST00000618423 90 ntBASIC19.24■□□□□ 0.67
NKX6-1P78426 pRNA.13-201ENST00000619112 90 ntBASIC19.24■□□□□ 0.67
NKX6-1P78426 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX6-1P78426 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX6-1P78426 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX6-1P78426 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-1P78426 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX6-1P78426 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 LINC01529-204ENST00000636474 1715 ntBASIC19.23■□□□□ 0.67
NKX6-1P78426 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-1P78426 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NKX6-1P78426 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX6-1P78426 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-1P78426 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NKX6-1P78426 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-1P78426 AC079630.1-202ENST00000618127 1840 ntBASIC19.23■□□□□ 0.67
NKX6-1P78426 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX6-1P78426 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NKX6-1P78426 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.22■□□□□ 0.67
NKX6-1P78426 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.22■□□□□ 0.67
NKX6-1P78426 AL499627.2-201ENST00000606283 725 ntBASIC19.22■□□□□ 0.67
NKX6-1P78426 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX6-1P78426 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NKX6-1P78426 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NKX6-1P78426 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX6-1P78426 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX6-1P78426 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NKX6-1P78426 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-1P78426 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NKX6-1P78426 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX6-1P78426 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX6-1P78426 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NKX6-1P78426 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX6-1P78426 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-1P78426 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
NKX6-1P78426 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
NKX6-1P78426 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX6-1P78426 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX6-1P78426 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
NKX6-1P78426 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NKX6-1P78426 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-1P78426 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX6-1P78426 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX6-1P78426 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX6-1P78426 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms