Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2NP61088 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
UBE2NP61088 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE2NP61088 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
UBE2NP61088 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBE2NP61088 AC019069.1-201ENST00000610008 1333 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2NP61088 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2NP61088 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2NP61088 MIR939-201ENST00000401314 82 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 AC099791.1-201ENST00000416440 715 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 SLC47A1P1-202ENST00000449666 945 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 SUDS3P1-201ENST00000505831 966 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2NP61088 AC126544.1-201ENST00000580842 1059 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 AL031432.3-201ENST00000607698 485 ntBASIC19.29■□□□□ 0.68
UBE2NP61088 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE2NP61088 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
UBE2NP61088 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2NP61088 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2NP61088 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2NP61088 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UBE2NP61088 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2NP61088 RASA4CP-201ENST00000424092 1398 ntBASIC19.28■□□□□ 0.68
UBE2NP61088 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2NP61088 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2NP61088 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.27■□□□□ 0.68
UBE2NP61088 AL136967.2-201ENST00000623968 743 ntBASIC19.27■□□□□ 0.68
UBE2NP61088 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.27■□□□□ 0.68
UBE2NP61088 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
UBE2NP61088 DUSP8P5-201ENST00000422884 1815 ntBASIC19.27■□□□□ 0.68
UBE2NP61088 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBE2NP61088 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBE2NP61088 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.26■□□□□ 0.67
UBE2NP61088 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2NP61088 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.26■□□□□ 0.67
UBE2NP61088 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBE2NP61088 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBE2NP61088 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2NP61088 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBE2NP61088 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.26■□□□□ 0.67
UBE2NP61088 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.26■□□□□ 0.67
UBE2NP61088 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UBE2NP61088 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2NP61088 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2NP61088 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2NP61088 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UBE2NP61088 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.25■□□□□ 0.67
UBE2NP61088 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.25■□□□□ 0.67
UBE2NP61088 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2NP61088 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2NP61088 CA15P2-201ENST00000611168 834 ntBASIC19.25■□□□□ 0.67
UBE2NP61088 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2NP61088 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.25■□□□□ 0.67
UBE2NP61088 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2NP61088 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2NP61088 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE2NP61088 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2NP61088 AC010525.1-201ENST00000585559 441 ntBASIC19.24■□□□□ 0.67
UBE2NP61088 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE2NP61088 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2NP61088 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBE2NP61088 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
UBE2NP61088 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
UBE2NP61088 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2NP61088 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2NP61088 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2NP61088 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2NP61088 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
UBE2NP61088 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE2NP61088 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.23■□□□□ 0.67
UBE2NP61088 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBE2NP61088 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.23■□□□□ 0.67
UBE2NP61088 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
UBE2NP61088 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
UBE2NP61088 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE2NP61088 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.23■□□□□ 0.67
UBE2NP61088 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2NP61088 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.23■□□□□ 0.67
UBE2NP61088 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2NP61088 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBE2NP61088 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.22■□□□□ 0.67
UBE2NP61088 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms