Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.28■■□□□ 1.8
PPP4CP60510 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4CP60510 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.27■■□□□ 1.8
PPP4CP60510 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.27■■□□□ 1.8
PPP4CP60510 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PPP4CP60510 LINC02228-203ENST00000641970 1355 ntBASIC26.27■■□□□ 1.8
PPP4CP60510 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4CP60510 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4CP60510 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.27■■□□□ 1.8
PPP4CP60510 DUSP8P3-201ENST00000399571 1760 ntBASIC26.26■■□□□ 1.79
PPP4CP60510 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PPP4CP60510 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.26■■□□□ 1.79
PPP4CP60510 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4CP60510 KRT18P5-201ENST00000436075 1291 ntBASIC26.26■■□□□ 1.79
PPP4CP60510 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4CP60510 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4CP60510 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.25■■□□□ 1.79
PPP4CP60510 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PPP4CP60510 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PPP4CP60510 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PPP4CP60510 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PPP4CP60510 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PPP4CP60510 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.25■■□□□ 1.79
PPP4CP60510 AC087239.1-201ENST00000622671 572 ntBASIC26.25■■□□□ 1.79
PPP4CP60510 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
PPP4CP60510 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.24■■□□□ 1.79
PPP4CP60510 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4CP60510 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
PPP4CP60510 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4CP60510 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4CP60510 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
PPP4CP60510 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4CP60510 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4CP60510 KRT18P14-201ENST00000534205 1250 ntBASIC26.23■■□□□ 1.79
PPP4CP60510 SMUG1P1-201ENST00000590640 811 ntBASIC26.23■■□□□ 1.79
PPP4CP60510 TPRG1LP1-201ENST00000598702 760 ntBASIC26.23■■□□□ 1.79
PPP4CP60510 OXCT2P1-201ENST00000447263 1535 ntBASIC26.23■■□□□ 1.79
PPP4CP60510 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
PPP4CP60510 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4CP60510 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PPP4CP60510 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PPP4CP60510 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PPP4CP60510 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.22■■□□□ 1.79
PPP4CP60510 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PPP4CP60510 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PPP4CP60510 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PPP4CP60510 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PPP4CP60510 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PPP4CP60510 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4CP60510 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PPP4CP60510 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PPP4CP60510 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
PPP4CP60510 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PPP4CP60510 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PPP4CP60510 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4CP60510 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PPP4CP60510 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.2■■□□□ 1.78
PPP4CP60510 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.2■■□□□ 1.78
PPP4CP60510 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4CP60510 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4CP60510 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4CP60510 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4CP60510 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4CP60510 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4CP60510 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.19■■□□□ 1.78
PPP4CP60510 AC022517.1-201ENST00000592429 346 ntBASIC26.19■■□□□ 1.78
PPP4CP60510 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.19■■□□□ 1.78
PPP4CP60510 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4CP60510 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4CP60510 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PPP4CP60510 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
PPP4CP60510 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4CP60510 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4CP60510 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4CP60510 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4CP60510 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4CP60510 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.18■■□□□ 1.78
PPP4CP60510 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4CP60510 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms