Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.33■□□□□ 0.69
FOXG1P55316 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.33■□□□□ 0.69
FOXG1P55316 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXG1P55316 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXG1P55316 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXG1P55316 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXG1P55316 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXG1P55316 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXG1P55316 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXG1P55316 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FOXG1P55316 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
FOXG1P55316 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXG1P55316 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FOXG1P55316 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXG1P55316 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
FOXG1P55316 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXG1P55316 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXG1P55316 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXG1P55316 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
FOXG1P55316 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXG1P55316 TSPY26P-201ENST00000476365 1326 ntBASIC19.31■□□□□ 0.68
FOXG1P55316 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXG1P55316 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FOXG1P55316 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXG1P55316 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXG1P55316 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXG1P55316 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FOXG1P55316 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXG1P55316 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXG1P55316 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXG1P55316 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXG1P55316 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FOXG1P55316 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXG1P55316 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXG1P55316 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FOXG1P55316 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXG1P55316 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXG1P55316 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXG1P55316 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 AL031602.1-201ENST00000633169 911 ntBASIC19.3■□□□□ 0.68
FOXG1P55316 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXG1P55316 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXG1P55316 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXG1P55316 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXG1P55316 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXG1P55316 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXG1P55316 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXG1P55316 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXG1P55316 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXG1P55316 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXG1P55316 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXG1P55316 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXG1P55316 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXG1P55316 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXG1P55316 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXG1P55316 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
FOXG1P55316 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXG1P55316 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXG1P55316 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXG1P55316 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FOXG1P55316 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXG1P55316 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXG1P55316 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXG1P55316 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXG1P55316 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
FOXG1P55316 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FOXG1P55316 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXG1P55316 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXG1P55316 IGHV3-19-201ENST00000521488 291 ntBASIC19.28■□□□□ 0.68
FOXG1P55316 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXG1P55316 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXG1P55316 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FOXG1P55316 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXG1P55316 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXG1P55316 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXG1P55316 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXG1P55316 C1orf229-201ENST00000623686 2258 ntBASIC19.27■□□□□ 0.68
FOXG1P55316 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXG1P55316 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXG1P55316 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXG1P55316 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXG1P55316 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.27■□□□□ 0.68
FOXG1P55316 AP005435.1-201ENST00000529293 1178 ntBASIC19.27■□□□□ 0.68
FOXG1P55316 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms