Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOC4P55056 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.12■□□□□ 0.17
APOC4P55056 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.12■□□□□ 0.17
APOC4P55056 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
APOC4P55056 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOC4P55056 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOC4P55056 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOC4P55056 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOC4P55056 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APOC4P55056 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.11■□□□□ 0.17
APOC4P55056 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.11■□□□□ 0.17
APOC4P55056 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
APOC4P55056 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
APOC4P55056 ANOS2P-203ENST00000472227 1816 ntBASIC16.11■□□□□ 0.17
APOC4P55056 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOC4P55056 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOC4P55056 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.11■□□□□ 0.17
APOC4P55056 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APOC4P55056 AC026271.2-201ENST00000428091 497 ntBASIC16.11■□□□□ 0.17
APOC4P55056 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.11■□□□□ 0.17
APOC4P55056 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.11■□□□□ 0.17
APOC4P55056 AC012414.1-201ENST00000556676 535 ntBASIC16.11■□□□□ 0.17
APOC4P55056 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.11■□□□□ 0.17
APOC4P55056 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOC4P55056 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
APOC4P55056 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOC4P55056 AC092068.2-201ENST00000590491 1708 ntBASIC16.11■□□□□ 0.17
APOC4P55056 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.1■□□□□ 0.17
APOC4P55056 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.1■□□□□ 0.17
APOC4P55056 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.1■□□□□ 0.17
APOC4P55056 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.1■□□□□ 0.17
APOC4P55056 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.1■□□□□ 0.17
APOC4P55056 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.1■□□□□ 0.17
APOC4P55056 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.1■□□□□ 0.17
APOC4P55056 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOC4P55056 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APOC4P55056 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
APOC4P55056 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.09■□□□□ 0.17
APOC4P55056 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.09■□□□□ 0.17
APOC4P55056 YBX1P1-201ENST00000445822 960 ntBASIC16.09■□□□□ 0.17
APOC4P55056 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 AC105233.4-201ENST00000642045 216 ntBASIC16.09■□□□□ 0.17
APOC4P55056 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
APOC4P55056 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.09■□□□□ 0.17
APOC4P55056 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APOC4P55056 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOC4P55056 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.09■□□□□ 0.17
APOC4P55056 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.08■□□□□ 0.16
APOC4P55056 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.08■□□□□ 0.16
APOC4P55056 AC027612.3-201ENST00000413684 1047 ntBASIC16.08■□□□□ 0.16
APOC4P55056 AC010141.3-201ENST00000456659 717 ntBASIC16.08■□□□□ 0.16
APOC4P55056 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.08■□□□□ 0.16
APOC4P55056 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.08■□□□□ 0.16
APOC4P55056 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
APOC4P55056 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.08■□□□□ 0.16
APOC4P55056 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.08■□□□□ 0.16
APOC4P55056 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.08■□□□□ 0.16
APOC4P55056 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.08■□□□□ 0.16
APOC4P55056 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
APOC4P55056 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
APOC4P55056 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APOC4P55056 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.07■□□□□ 0.16
APOC4P55056 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APOC4P55056 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.07■□□□□ 0.16
APOC4P55056 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.07■□□□□ 0.16
APOC4P55056 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.07■□□□□ 0.16
APOC4P55056 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.07■□□□□ 0.16
APOC4P55056 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.07■□□□□ 0.16
APOC4P55056 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.07■□□□□ 0.16
APOC4P55056 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APOC4P55056 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APOC4P55056 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.07■□□□□ 0.16
APOC4P55056 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.07■□□□□ 0.16
APOC4P55056 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
APOC4P55056 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOC4P55056 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.06■□□□□ 0.16
APOC4P55056 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms