Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CLNS1AP54105 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
CLNS1AP54105 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 KRT18P60-201ENST00000312876 1297 ntBASIC21.72■■□□□ 1.07
CLNS1AP54105 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.72■■□□□ 1.07
CLNS1AP54105 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CLNS1AP54105 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CLNS1AP54105 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CLNS1AP54105 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CLNS1AP54105 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLNS1AP54105 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLNS1AP54105 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLNS1AP54105 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.71■■□□□ 1.07
CLNS1AP54105 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CLNS1AP54105 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CLNS1AP54105 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLNS1AP54105 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.71■■□□□ 1.07
CLNS1AP54105 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.71■■□□□ 1.07
CLNS1AP54105 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLNS1AP54105 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLNS1AP54105 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLNS1AP54105 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
CLNS1AP54105 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CLNS1AP54105 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CLNS1AP54105 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.7■■□□□ 1.06
CLNS1AP54105 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLNS1AP54105 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLNS1AP54105 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.69■■□□□ 1.06
CLNS1AP54105 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.69■■□□□ 1.06
CLNS1AP54105 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.69■■□□□ 1.06
CLNS1AP54105 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.69■■□□□ 1.06
CLNS1AP54105 AC139795.1-202ENST00000500444 432 ntBASIC21.69■■□□□ 1.06
CLNS1AP54105 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.69■■□□□ 1.06
CLNS1AP54105 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
CLNS1AP54105 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 AC131274.2-201ENST00000580697 1507 ntBASIC21.69■■□□□ 1.06
CLNS1AP54105 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLNS1AP54105 ALDH1A3-203ENST00000557963 1670 ntBASIC21.69■■□□□ 1.06
CLNS1AP54105 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
CLNS1AP54105 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.68■■□□□ 1.06
CLNS1AP54105 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.68■■□□□ 1.06
CLNS1AP54105 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLNS1AP54105 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.68■■□□□ 1.06
CLNS1AP54105 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.67■■□□□ 1.06
CLNS1AP54105 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLNS1AP54105 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLNS1AP54105 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLNS1AP54105 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.66■■□□□ 1.06
CLNS1AP54105 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLNS1AP54105 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.66■■□□□ 1.06
CLNS1AP54105 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CLNS1AP54105 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.66■■□□□ 1.06
CLNS1AP54105 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLNS1AP54105 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLNS1AP54105 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLNS1AP54105 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CLNS1AP54105 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms