Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC9A3P48764 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC9A3P48764 AC092028.1-203ENST00000608262 953 ntBASIC20.07■□□□□ 0.8
SLC9A3P48764 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC9A3P48764 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC9A3P48764 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC9A3P48764 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC9A3P48764 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC9A3P48764 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC9A3P48764 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC9A3P48764 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC9A3P48764 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.06■□□□□ 0.8
SLC9A3P48764 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
SLC9A3P48764 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC9A3P48764 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC9A3P48764 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
SLC9A3P48764 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC9A3P48764 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC9A3P48764 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC9A3P48764 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC9A3P48764 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC9A3P48764 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC9A3P48764 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC9A3P48764 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC9A3P48764 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SLC9A3P48764 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC9A3P48764 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SLC9A3P48764 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC9A3P48764 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC9A3P48764 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC9A3P48764 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC9A3P48764 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC9A3P48764 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC9A3P48764 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC9A3P48764 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC9A3P48764 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC9A3P48764 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC9A3P48764 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC9A3P48764 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC9A3P48764 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC9A3P48764 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC9A3P48764 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SLC9A3P48764 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC9A3P48764 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC9A3P48764 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC9A3P48764 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC9A3P48764 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC9A3P48764 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC9A3P48764 DUX4L4-201ENST00000566884 1269 ntBASIC20.02■□□□□ 0.8
SLC9A3P48764 MTDHP2-201ENST00000601468 714 ntBASIC20.02■□□□□ 0.8
SLC9A3P48764 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC9A3P48764 AC009086.3-201ENST00000623486 1008 ntBASIC20.02■□□□□ 0.8
SLC9A3P48764 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC9A3P48764 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SLC9A3P48764 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SLC9A3P48764 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC9A3P48764 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC9A3P48764 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC9A3P48764 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SLC9A3P48764 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC9A3P48764 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC9A3P48764 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC9A3P48764 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC9A3P48764 AL137060.1-201ENST00000618151 2648 ntBASIC20.01■□□□□ 0.79
SLC9A3P48764 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC9A3P48764 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
SLC9A3P48764 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC9A3P48764 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC9A3P48764 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC9A3P48764 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 RNF165-205ENST00000588679 2904 ntBASIC20■□□□□ 0.79
SLC9A3P48764 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC9A3P48764 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLC9A3P48764 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20■□□□□ 0.79
SLC9A3P48764 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20■□□□□ 0.79
SLC9A3P48764 MIR4787-201ENST00000607364 84 ntBASIC20■□□□□ 0.79
SLC9A3P48764 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20■□□□□ 0.79
SLC9A3P48764 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLC9A3P48764 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLC9A3P48764 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC9A3P48764 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC9A3P48764 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC9A3P48764 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC9A3P48764 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC9A3P48764 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC9A3P48764 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC9A3P48764 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms