Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A6P48664 LINC01529-204ENST00000636474 1715 ntBASIC21.6■■□□□ 1.05
SLC1A6P48664 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SLC1A6P48664 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC1A6P48664 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC1A6P48664 SNX5-217ENST00000606557 1087 ntBASIC21.6■■□□□ 1.05
SLC1A6P48664 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC1A6P48664 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SLC1A6P48664 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC1A6P48664 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC1A6P48664 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC1A6P48664 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SLC1A6P48664 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A6P48664 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SLC1A6P48664 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A6P48664 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A6P48664 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A6P48664 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A6P48664 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC1A6P48664 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A6P48664 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A6P48664 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC1A6P48664 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC1A6P48664 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A6P48664 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A6P48664 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A6P48664 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SLC1A6P48664 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC1A6P48664 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.58■■□□□ 1.05
SLC1A6P48664 NTF6A-201ENST00000591175 560 ntBASIC21.58■■□□□ 1.05
SLC1A6P48664 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A6P48664 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC1A6P48664 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC1A6P48664 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC1A6P48664 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC1A6P48664 LINC01960-201ENST00000563759 1884 ntBASIC21.58■■□□□ 1.04
SLC1A6P48664 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC1A6P48664 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.58■■□□□ 1.04
SLC1A6P48664 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC1A6P48664 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC1A6P48664 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC1A6P48664 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.57■■□□□ 1.04
SLC1A6P48664 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC1A6P48664 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.57■■□□□ 1.04
SLC1A6P48664 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SLC1A6P48664 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC1A6P48664 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC1A6P48664 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLC1A6P48664 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC1A6P48664 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC1A6P48664 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC1A6P48664 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC1A6P48664 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC1A6P48664 AC010980.1-201ENST00000587192 1142 ntBASIC21.56■■□□□ 1.04
SLC1A6P48664 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC1A6P48664 FP325331.1-202ENST00000623531 1380 ntBASIC21.56■■□□□ 1.04
SLC1A6P48664 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.55■■□□□ 1.04
SLC1A6P48664 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC1A6P48664 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC1A6P48664 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC1A6P48664 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
SLC1A6P48664 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC1A6P48664 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.55■■□□□ 1.04
SLC1A6P48664 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC1A6P48664 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SLC1A6P48664 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC1A6P48664 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC1A6P48664 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SLC1A6P48664 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC1A6P48664 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SLC1A6P48664 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC1A6P48664 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
SLC1A6P48664 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC1A6P48664 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC1A6P48664 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC1A6P48664 AC004987.1-201ENST00000428627 508 ntBASIC21.54■■□□□ 1.04
SLC1A6P48664 ATP5G2P3-201ENST00000429083 425 ntBASIC21.54■■□□□ 1.04
SLC1A6P48664 ABHD17AP5-201ENST00000580133 923 ntBASIC21.54■■□□□ 1.04
SLC1A6P48664 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC1A6P48664 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC1A6P48664 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC1A6P48664 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A6P48664 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SLC1A6P48664 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SLC1A6P48664 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A6P48664 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.53■■□□□ 1.04
SLC1A6P48664 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A6P48664 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A6P48664 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A6P48664 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC1A6P48664 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A6P48664 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A6P48664 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
SLC1A6P48664 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms