Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 GPP1YIL053W 753 nt4.42□□□□□ -1.7
UPF3P48412 tX(XXX)DtX(XXX)D 100 nt4.42□□□□□ -1.7
UPF3P48412 OAR1YKL055C 837 nt4.42□□□□□ -1.7
UPF3P48412 YLL047WYLL047W 384 nt4.42□□□□□ -1.7
UPF3P48412 YLR042CYLR042C 486 nt4.42□□□□□ -1.7
UPF3P48412 SWC7YLR385C 399 nt4.42□□□□□ -1.7
UPF3P48412 DSS1YMR287C 2910 nt4.42□□□□□ -1.7
UPF3P48412 MDJ2YNL328C 441 nt4.42□□□□□ -1.7
UPF3P48412 RRP14YKL082C 1305 nt4.42□□□□□ -1.7
UPF3P48412 APC1YNL172W 5247 nt4.42□□□□□ -1.7
UPF3P48412 ISW2YOR304W 3363 nt4.42□□□□□ -1.7
UPF3P48412 AGA1YNR044W 2178 nt4.41□□□□□ -1.7
UPF3P48412 CLG1YGL215W 1359 nt4.41□□□□□ -1.7
UPF3P48412 TED1YIL039W 1422 nt4.41□□□□□ -1.7
UPF3P48412 DSL1YNL258C 2265 nt4.41□□□□□ -1.7
UPF3P48412 NUP133YKR082W 3474 nt4.41□□□□□ -1.7
UPF3P48412 YAL047W-AYAL047W-A 330 nt4.41□□□□□ -1.7
UPF3P48412 APS1YLR170C 471 nt4.41□□□□□ -1.7
UPF3P48412 CPR6YLR216C 1116 nt4.41□□□□□ -1.7
UPF3P48412 ECM15YBL001C 315 nt4.41□□□□□ -1.7
UPF3P48412 DCS2YOR173W 1062 nt4.41□□□□□ -1.7
UPF3P48412 MGR2YPL098C 342 nt4.41□□□□□ -1.7
UPF3P48412 MUM2YBR057C 1101 nt4.41□□□□□ -1.7
UPF3P48412 PRM1YNL279W 1986 nt4.41□□□□□ -1.7
UPF3P48412 SSH4YKL124W 1740 nt4.41□□□□□ -1.7
UPF3P48412 YKR015CYKR015C 1707 nt4.41□□□□□ -1.7
UPF3P48412 MET12YPL023C 1974 nt4.4□□□□□ -1.7
UPF3P48412 YDL027CYDL027C 1263 nt4.4□□□□□ -1.71
UPF3P48412 ARG82YDR173C 1068 nt4.4□□□□□ -1.71
UPF3P48412 SNA2YDR525W-A 240 nt4.4□□□□□ -1.71
UPF3P48412 SPO73YER046W 432 nt4.4□□□□□ -1.71
UPF3P48412 TYW3YGL050W 822 nt4.4□□□□□ -1.71
UPF3P48412 YIL025CYIL025C 375 nt4.4□□□□□ -1.71
UPF3P48412 MNN11YJL183W 1269 nt4.4□□□□□ -1.71
UPF3P48412 REE1YJL217W 597 nt4.4□□□□□ -1.71
UPF3P48412 YAR023CYAR023C 540 nt4.4□□□□□ -1.71
UPF3P48412 NMA1YLR328W 1206 nt4.4□□□□□ -1.71
UPF3P48412 YMR010WYMR010W 1218 nt4.4□□□□□ -1.71
UPF3P48412 MRPS17YMR188C 714 nt4.4□□□□□ -1.71
UPF3P48412 SAP30YMR263W 606 nt4.4□□□□□ -1.71
UPF3P48412 CYC2YOR037W 1101 nt4.4□□□□□ -1.71
UPF3P48412 POC4YPL144W 447 nt4.4□□□□□ -1.71
UPF3P48412 CBP3YPL215W 1008 nt4.4□□□□□ -1.71
UPF3P48412 YPL260WYPL260W 1656 nt4.4□□□□□ -1.71
UPF3P48412 GRC3YLL035W 1899 nt4.4□□□□□ -1.71
UPF3P48412 SWI3YJL176C 2478 nt4.4□□□□□ -1.71
UPF3P48412 AIM14YGL160W 1713 nt4.4□□□□□ -1.71
UPF3P48412 NUP2YLR335W 2163 nt4.4□□□□□ -1.71
UPF3P48412 KAP114YGL241W 3015 nt4.4□□□□□ -1.71
UPF3P48412 ALO1YML086C 1581 nt4.4□□□□□ -1.71
UPF3P48412 IZH3YLR023C 1632 nt4.39□□□□□ -1.71
UPF3P48412 ATM1YMR301C 2073 nt4.39□□□□□ -1.71
UPF3P48412 PCL2YDL127W 927 nt4.39□□□□□ -1.71
UPF3P48412 NOP6YDL213C 678 nt4.39□□□□□ -1.71
UPF3P48412 RCR2YDR003W 633 nt4.39□□□□□ -1.71
UPF3P48412 YGL132WYGL132W 336 nt4.39□□□□□ -1.71
UPF3P48412 SOL3YHR163W 750 nt4.39□□□□□ -1.71
UPF3P48412 RNA14YMR061W 2034 nt4.39□□□□□ -1.71
UPF3P48412 SAP4YGL229C 2457 nt4.38□□□□□ -1.71
UPF3P48412 ZPR1YGR211W 1461 nt4.38□□□□□ -1.71
UPF3P48412 RRG1YDR065W 1098 nt4.38□□□□□ -1.71
UPF3P48412 SPI1YER150W 447 nt4.38□□□□□ -1.71
UPF3P48412 LYS5YGL154C 819 nt4.38□□□□□ -1.71
UPF3P48412 CAB2YIL083C 1098 nt4.38□□□□□ -1.71
UPF3P48412 LSO1YJR005C-A 282 nt4.38□□□□□ -1.71
UPF3P48412 YJR012CYJR012C 624 nt4.38□□□□□ -1.71
UPF3P48412 MTD1YKR080W 963 nt4.38□□□□□ -1.71
UPF3P48412 YAL065CYAL065C 387 nt4.38□□□□□ -1.71
UPF3P48412 PSF3YOL146W 585 nt4.38□□□□□ -1.71
UPF3P48412 YOR114WYOR114W 885 nt4.38□□□□□ -1.71
UPF3P48412 RFM1YOR279C 933 nt4.38□□□□□ -1.71
UPF3P48412 ECM8YBR076W 1065 nt4.38□□□□□ -1.71
UPF3P48412 YPR142CYPR142C 564 nt4.38□□□□□ -1.71
UPF3P48412 RRI1YDL216C 1323 nt4.38□□□□□ -1.71
UPF3P48412 PST1YDR055W 1335 nt4.38□□□□□ -1.71
UPF3P48412 HMG1YML075C 3165 nt4.38□□□□□ -1.71
UPF3P48412 HCM1YCR065W 1695 nt4.38□□□□□ -1.71
UPF3P48412 TDA6YPR157W 1404 nt4.38□□□□□ -1.71
UPF3P48412 PAH1YMR165C 2589 nt4.37□□□□□ -1.71
UPF3P48412 MNR2YKL064W 2910 nt4.37□□□□□ -1.71
UPF3P48412 ARF2YDL137W 546 nt4.37□□□□□ -1.71
UPF3P48412 ERV29YGR284C 933 nt4.37□□□□□ -1.71
UPF3P48412 LSM12YHR121W 564 nt4.37□□□□□ -1.71
UPF3P48412 AAD10YJR155W 867 nt4.37□□□□□ -1.71
UPF3P48412 CUZ1YNL155W 825 nt4.37□□□□□ -1.71
UPF3P48412 IDI1YPL117C 867 nt4.37□□□□□ -1.71
UPF3P48412 UMP1YBR173C 447 nt4.37□□□□□ -1.71
UPF3P48412 PUB1YNL016W 1362 nt4.37□□□□□ -1.71
UPF3P48412 YVC1YOR087W 2028 nt4.36□□□□□ -1.71
UPF3P48412 PHO84YML123C 1764 nt4.36□□□□□ -1.71
UPF3P48412 YCR075W-AYCR075W-A 228 nt4.36□□□□□ -1.71
UPF3P48412 RDI1YDL135C 609 nt4.36□□□□□ -1.71
UPF3P48412 GMH1YKR030W 822 nt4.36□□□□□ -1.71
UPF3P48412 TVP38YKR088C 1014 nt4.36□□□□□ -1.71
UPF3P48412 ATG33YLR356W 594 nt4.36□□□□□ -1.71
UPF3P48412 MDM12YOL009C 816 nt4.36□□□□□ -1.71
UPF3P48412 KTR6YPL053C 1341 nt4.36□□□□□ -1.71
UPF3P48412 VBA2YBR293W 1425 nt4.36□□□□□ -1.71
UPF3P48412 NAT1YDL040C 2565 nt4.36□□□□□ -1.71
UPF3P48412 BCK2YER167W 2556 nt4.36□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms