Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.3■■□□□ 1
SLC6A12P48065 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.3■■□□□ 1
SLC6A12P48065 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC6A12P48065 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A12P48065 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A12P48065 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A12P48065 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC6A12P48065 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SLC6A12P48065 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.29■■□□□ 1
SLC6A12P48065 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.29■■□□□ 1
SLC6A12P48065 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.29■■□□□ 1
SLC6A12P48065 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.29■■□□□ 1
SLC6A12P48065 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.29■■□□□ 1
SLC6A12P48065 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.28■■□□□ 1
SLC6A12P48065 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.28■■□□□ 1
SLC6A12P48065 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SLC6A12P48065 CA15P2-201ENST00000611168 834 ntBASIC21.28■■□□□ 1
SLC6A12P48065 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC6A12P48065 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A12P48065 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A12P48065 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
SLC6A12P48065 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.27■■□□□ 1
SLC6A12P48065 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
SLC6A12P48065 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.27■■□□□ 1
SLC6A12P48065 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC6A12P48065 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
SLC6A12P48065 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A12P48065 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A12P48065 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC6A12P48065 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A12P48065 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SLC6A12P48065 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SLC6A12P48065 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC6A12P48065 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A12P48065 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC6A12P48065 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC6A12P48065 AL031602.1-201ENST00000633169 911 ntBASIC21.26■□□□□ 0.99
SLC6A12P48065 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A12P48065 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC6A12P48065 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A12P48065 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A12P48065 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A12P48065 AC137767.1-201ENST00000602918 1920 ntBASIC21.25■□□□□ 0.99
SLC6A12P48065 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC6A12P48065 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A12P48065 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A12P48065 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC6A12P48065 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A12P48065 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A12P48065 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A12P48065 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A12P48065 SERBP1P1-201ENST00000396021 1160 ntBASIC21.24■□□□□ 0.99
SLC6A12P48065 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.24■□□□□ 0.99
SLC6A12P48065 AL138724.1-201ENST00000606771 1088 ntBASIC21.24■□□□□ 0.99
SLC6A12P48065 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A12P48065 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A12P48065 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A12P48065 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A12P48065 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A12P48065 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A12P48065 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A12P48065 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A12P48065 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SLC6A12P48065 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC6A12P48065 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A12P48065 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.23■□□□□ 0.99
SLC6A12P48065 OR2I1P-207ENST00000453522 948 ntBASIC21.23■□□□□ 0.99
SLC6A12P48065 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 DUX4L19-201ENST00000557448 1267 ntBASIC21.23■□□□□ 0.99
SLC6A12P48065 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SLC6A12P48065 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A12P48065 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms