Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-1P43699 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-1P43699 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NKX2-1P43699 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX2-1P43699 MIR6765-201ENST00000614092 87 ntBASIC17.96■□□□□ 0.47
NKX2-1P43699 FAM99A-202ENST00000538190 1989 ntBASIC17.96■□□□□ 0.47
NKX2-1P43699 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-1P43699 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX2-1P43699 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-1P43699 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-1P43699 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX2-1P43699 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
NKX2-1P43699 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.96■□□□□ 0.46
NKX2-1P43699 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX2-1P43699 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-1P43699 LONRF2P2-201ENST00000439212 571 ntBASIC17.95■□□□□ 0.46
NKX2-1P43699 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
NKX2-1P43699 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX2-1P43699 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-1P43699 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NKX2-1P43699 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-1P43699 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX2-1P43699 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-1P43699 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NKX2-1P43699 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-1P43699 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-1P43699 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-1P43699 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NKX2-1P43699 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
NKX2-1P43699 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-1P43699 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-1P43699 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX2-1P43699 AL592293.1-201ENST00000502889 1188 ntBASIC17.93■□□□□ 0.46
NKX2-1P43699 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-1P43699 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-1P43699 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NKX2-1P43699 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-1P43699 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NKX2-1P43699 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-1P43699 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
NKX2-1P43699 AC010542.4-201ENST00000563151 1910 ntBASIC17.92■□□□□ 0.46
NKX2-1P43699 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
NKX2-1P43699 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NKX2-1P43699 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-1P43699 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-1P43699 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-1P43699 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-1P43699 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-1P43699 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-1P43699 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-1P43699 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NKX2-1P43699 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-1P43699 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
NKX2-1P43699 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-1P43699 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NKX2-1P43699 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NKX2-1P43699 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-1P43699 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
NKX2-1P43699 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-1P43699 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX2-1P43699 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-1P43699 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-1P43699 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX2-1P43699 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-1P43699 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-1P43699 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-1P43699 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX2-1P43699 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-1P43699 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.89■□□□□ 0.46
NKX2-1P43699 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.89■□□□□ 0.46
NKX2-1P43699 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NKX2-1P43699 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-1P43699 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NKX2-1P43699 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-1P43699 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-1P43699 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-1P43699 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-1P43699 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms