Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SSR2P43308 SERBP1P1-201ENST00000396021 1160 ntBASIC20.95■□□□□ 0.94
SSR2P43308 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
SSR2P43308 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SSR2P43308 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SSR2P43308 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SSR2P43308 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.94■□□□□ 0.94
SSR2P43308 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSR2P43308 LINC01960-201ENST00000563759 1884 ntBASIC20.94■□□□□ 0.94
SSR2P43308 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.94■□□□□ 0.94
SSR2P43308 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SSR2P43308 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.93■□□□□ 0.94
SSR2P43308 AL138724.1-201ENST00000606771 1088 ntBASIC20.93■□□□□ 0.94
SSR2P43308 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 ESRRAP2-201ENST00000418437 1549 ntBASIC20.93■□□□□ 0.94
SSR2P43308 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSR2P43308 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR2P43308 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.92■□□□□ 0.94
SSR2P43308 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR2P43308 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SSR2P43308 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR2P43308 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.92■□□□□ 0.94
SSR2P43308 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR2P43308 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR2P43308 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR2P43308 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.92■□□□□ 0.94
SSR2P43308 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SSR2P43308 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SSR2P43308 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSR2P43308 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR2P43308 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.92■□□□□ 0.94
SSR2P43308 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SSR2P43308 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR2P43308 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR2P43308 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR2P43308 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR2P43308 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR2P43308 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.91■□□□□ 0.94
SSR2P43308 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR2P43308 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR2P43308 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR2P43308 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
SSR2P43308 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR2P43308 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR2P43308 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR2P43308 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.9■□□□□ 0.94
SSR2P43308 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR2P43308 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSR2P43308 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR2P43308 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR2P43308 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SSR2P43308 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.89■□□□□ 0.94
SSR2P43308 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.89■□□□□ 0.94
SSR2P43308 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.89■□□□□ 0.93
SSR2P43308 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SSR2P43308 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 AC011298.3-201ENST00000615796 283 ntBASIC20.89■□□□□ 0.93
SSR2P43308 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.89■□□□□ 0.93
SSR2P43308 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR2P43308 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR2P43308 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR2P43308 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SSR2P43308 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR2P43308 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR2P43308 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR2P43308 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR2P43308 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SSR2P43308 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SSR2P43308 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR2P43308 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR2P43308 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR2P43308 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SSR2P43308 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms