Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GDNFP39905 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.08■□□□□ 0.64
GDNFP39905 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.08■□□□□ 0.64
GDNFP39905 AC011551.1-201ENST00000614101 683 ntBASIC19.08■□□□□ 0.64
GDNFP39905 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.08■□□□□ 0.64
GDNFP39905 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.08■□□□□ 0.64
GDNFP39905 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GDNFP39905 AC073130.3-201ENST00000624389 2278 ntBASIC19.08■□□□□ 0.64
GDNFP39905 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GDNFP39905 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GDNFP39905 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GDNFP39905 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.07■□□□□ 0.64
GDNFP39905 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
GDNFP39905 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.07■□□□□ 0.64
GDNFP39905 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GDNFP39905 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.07■□□□□ 0.64
GDNFP39905 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GDNFP39905 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
GDNFP39905 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.07■□□□□ 0.64
GDNFP39905 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDNFP39905 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GDNFP39905 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.06■□□□□ 0.64
GDNFP39905 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GDNFP39905 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GDNFP39905 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
GDNFP39905 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
GDNFP39905 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.06■□□□□ 0.64
GDNFP39905 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GDNFP39905 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GDNFP39905 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GDNFP39905 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
GDNFP39905 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
GDNFP39905 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GDNFP39905 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GDNFP39905 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GDNFP39905 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GDNFP39905 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GDNFP39905 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GDNFP39905 AC103724.3-201ENST00000564481 992 ntBASIC19.05■□□□□ 0.64
GDNFP39905 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GDNFP39905 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.05■□□□□ 0.64
GDNFP39905 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GDNFP39905 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GDNFP39905 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.04■□□□□ 0.64
GDNFP39905 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 KRT18P24-201ENST00000344739 1156 ntBASIC19.04■□□□□ 0.64
GDNFP39905 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.04■□□□□ 0.64
GDNFP39905 THA1P-201ENST00000590384 1145 ntBASIC19.04■□□□□ 0.64
GDNFP39905 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDNFP39905 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
GDNFP39905 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
GDNFP39905 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
GDNFP39905 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GDNFP39905 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 YBX1P4-201ENST00000392794 808 ntBASIC19.03■□□□□ 0.64
GDNFP39905 MIR4281-201ENST00000580852 62 ntBASIC19.03■□□□□ 0.64
GDNFP39905 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.03■□□□□ 0.64
GDNFP39905 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GDNFP39905 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDNFP39905 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.02■□□□□ 0.64
GDNFP39905 FAM99A-202ENST00000538190 1989 ntBASIC19.02■□□□□ 0.64
GDNFP39905 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
GDNFP39905 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GDNFP39905 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
GDNFP39905 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDNFP39905 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDNFP39905 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDNFP39905 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDNFP39905 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms