Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCNN1AP37088 AC110285.6-201ENST00000617652 491 ntBASIC22.99■■□□□ 1.27
SCNN1AP37088 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCNN1AP37088 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SCNN1AP37088 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.99■■□□□ 1.27
SCNN1AP37088 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCNN1AP37088 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.98■■□□□ 1.27
SCNN1AP37088 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SCNN1AP37088 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.98■■□□□ 1.27
SCNN1AP37088 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.98■■□□□ 1.27
SCNN1AP37088 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.98■■□□□ 1.27
SCNN1AP37088 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCNN1AP37088 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCNN1AP37088 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SCNN1AP37088 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SCNN1AP37088 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SCNN1AP37088 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCNN1AP37088 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SCNN1AP37088 BX842568.3-201ENST00000418104 571 ntBASIC22.97■■□□□ 1.27
SCNN1AP37088 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.97■■□□□ 1.27
SCNN1AP37088 SLC47A1P1-202ENST00000449666 945 ntBASIC22.97■■□□□ 1.27
SCNN1AP37088 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.97■■□□□ 1.27
SCNN1AP37088 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.97■■□□□ 1.27
SCNN1AP37088 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCNN1AP37088 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCNN1AP37088 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.96■■□□□ 1.27
SCNN1AP37088 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SCNN1AP37088 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SCNN1AP37088 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.96■■□□□ 1.27
SCNN1AP37088 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
SCNN1AP37088 AP005435.1-201ENST00000529293 1178 ntBASIC22.96■■□□□ 1.27
SCNN1AP37088 AC010525.1-201ENST00000585559 441 ntBASIC22.96■■□□□ 1.27
SCNN1AP37088 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 AC133561.1-201ENST00000568600 2415 ntBASIC22.96■■□□□ 1.27
SCNN1AP37088 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
SCNN1AP37088 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCNN1AP37088 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCNN1AP37088 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCNN1AP37088 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCNN1AP37088 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SCNN1AP37088 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SCNN1AP37088 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.95■■□□□ 1.26
SCNN1AP37088 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.95■■□□□ 1.26
SCNN1AP37088 AC133561.4-201ENST00000566112 224 ntBASIC22.95■■□□□ 1.26
SCNN1AP37088 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCNN1AP37088 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.94■■□□□ 1.26
SCNN1AP37088 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SCNN1AP37088 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCNN1AP37088 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SCNN1AP37088 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.94■■□□□ 1.26
SCNN1AP37088 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SCNN1AP37088 EDA-201ENST00000338901 1233 ntBASIC22.94■■□□□ 1.26
SCNN1AP37088 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.94■■□□□ 1.26
SCNN1AP37088 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.94■■□□□ 1.26
SCNN1AP37088 PBX2P1-201ENST00000493219 1291 ntBASIC22.94■■□□□ 1.26
SCNN1AP37088 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCNN1AP37088 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SCNN1AP37088 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCNN1AP37088 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.93■■□□□ 1.26
SCNN1AP37088 AC233723.2-201ENST00000623798 2106 ntBASIC22.93■■□□□ 1.26
SCNN1AP37088 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SCNN1AP37088 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.93■■□□□ 1.26
SCNN1AP37088 AL139246.5-201ENST00000606645 996 ntBASIC22.93■■□□□ 1.26
SCNN1AP37088 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCNN1AP37088 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SCNN1AP37088 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.92■■□□□ 1.26
SCNN1AP37088 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
SCNN1AP37088 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.92■■□□□ 1.26
SCNN1AP37088 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SCNN1AP37088 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
SCNN1AP37088 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.92■■□□□ 1.26
SCNN1AP37088 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.92■■□□□ 1.26
SCNN1AP37088 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SCNN1AP37088 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCNN1AP37088 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SCNN1AP37088 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
SCNN1AP37088 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SCNN1AP37088 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SCNN1AP37088 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.91■■□□□ 1.26
SCNN1AP37088 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SCNN1AP37088 AC233992.3-201ENST00000607491 485 ntBASIC22.91■■□□□ 1.26
SCNN1AP37088 AC087239.1-201ENST00000622671 572 ntBASIC22.91■■□□□ 1.26
SCNN1AP37088 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SCNN1AP37088 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SCNN1AP37088 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.91■■□□□ 1.26
SCNN1AP37088 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SCNN1AP37088 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms