Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
THBS4P35443 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS4P35443 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS4P35443 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.28■□□□□ 0.68
THBS4P35443 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS4P35443 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS4P35443 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
THBS4P35443 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS4P35443 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS4P35443 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.27■□□□□ 0.68
THBS4P35443 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS4P35443 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.27■□□□□ 0.68
THBS4P35443 MIR3181-201ENST00000578512 73 ntBASIC19.27■□□□□ 0.68
THBS4P35443 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.27■□□□□ 0.68
THBS4P35443 AL138724.1-201ENST00000606771 1088 ntBASIC19.27■□□□□ 0.68
THBS4P35443 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.27■□□□□ 0.68
THBS4P35443 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS4P35443 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS4P35443 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
THBS4P35443 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
THBS4P35443 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 ECEL1P1-201ENST00000373592 1742 ntBASIC19.26■□□□□ 0.67
THBS4P35443 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.26■□□□□ 0.67
THBS4P35443 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
THBS4P35443 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.26■□□□□ 0.67
THBS4P35443 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.26■□□□□ 0.67
THBS4P35443 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.26■□□□□ 0.67
THBS4P35443 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.26■□□□□ 0.67
THBS4P35443 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS4P35443 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.26■□□□□ 0.67
THBS4P35443 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
THBS4P35443 AC144652.1-201ENST00000609974 1624 ntBASIC19.25■□□□□ 0.67
THBS4P35443 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
THBS4P35443 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
THBS4P35443 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
THBS4P35443 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.25■□□□□ 0.67
THBS4P35443 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.25■□□□□ 0.67
THBS4P35443 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.25■□□□□ 0.67
THBS4P35443 MIR4767-201ENST00000582827 78 ntBASIC19.25■□□□□ 0.67
THBS4P35443 pRNA.6-201ENST00000610482 90 ntBASIC19.25■□□□□ 0.67
THBS4P35443 pRNA.5-201ENST00000612139 90 ntBASIC19.25■□□□□ 0.67
THBS4P35443 pRNA.11-201ENST00000618423 90 ntBASIC19.25■□□□□ 0.67
THBS4P35443 pRNA.13-201ENST00000619112 90 ntBASIC19.25■□□□□ 0.67
THBS4P35443 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
THBS4P35443 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
THBS4P35443 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS4P35443 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
THBS4P35443 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.24■□□□□ 0.67
THBS4P35443 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
THBS4P35443 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS4P35443 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 EDA-201ENST00000338901 1233 ntBASIC19.24■□□□□ 0.67
THBS4P35443 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.24■□□□□ 0.67
THBS4P35443 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
THBS4P35443 AC142381.2-201ENST00000566120 298 ntBASIC19.24■□□□□ 0.67
THBS4P35443 AL031432.3-201ENST00000607698 485 ntBASIC19.24■□□□□ 0.67
THBS4P35443 AC011298.3-201ENST00000615796 283 ntBASIC19.24■□□□□ 0.67
THBS4P35443 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS4P35443 AL355001.2-201ENST00000620617 1191 ntBASIC19.24■□□□□ 0.67
THBS4P35443 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.24■□□□□ 0.67
THBS4P35443 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS4P35443 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS4P35443 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS4P35443 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.23■□□□□ 0.67
THBS4P35443 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
THBS4P35443 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
THBS4P35443 FP325331.1-202ENST00000623531 1380 ntBASIC19.23■□□□□ 0.67
THBS4P35443 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms