Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CKS2P33552 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.14■□□□□ 0.17
CKS2P33552 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CKS2P33552 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CKS2P33552 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.14■□□□□ 0.17
CKS2P33552 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CKS2P33552 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.13■□□□□ 0.17
CKS2P33552 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.13■□□□□ 0.17
CKS2P33552 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.13■□□□□ 0.17
CKS2P33552 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.13■□□□□ 0.17
CKS2P33552 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.13■□□□□ 0.17
CKS2P33552 MIR3648-2-201ENST00000581792 180 ntBASIC16.13■□□□□ 0.17
CKS2P33552 RAP2CP1-202ENST00000605179 643 ntBASIC16.13■□□□□ 0.17
CKS2P33552 MIR3648-1-201ENST00000615959 180 ntBASIC16.13■□□□□ 0.17
CKS2P33552 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.13■□□□□ 0.17
CKS2P33552 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CKS2P33552 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKS2P33552 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS2P33552 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.12■□□□□ 0.17
CKS2P33552 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CKS2P33552 AL592295.1-201ENST00000400984 884 ntBASIC16.12■□□□□ 0.17
CKS2P33552 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.12■□□□□ 0.17
CKS2P33552 AC026202.3-201ENST00000600805 1127 ntBASIC16.12■□□□□ 0.17
CKS2P33552 AC007029.1-201ENST00000604183 313 ntBASIC16.12■□□□□ 0.17
CKS2P33552 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKS2P33552 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS2P33552 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS2P33552 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CKS2P33552 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS2P33552 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CKS2P33552 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CKS2P33552 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.11■□□□□ 0.17
CKS2P33552 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CKS2P33552 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 FAM99A-202ENST00000538190 1989 ntBASIC16.11■□□□□ 0.17
CKS2P33552 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.11■□□□□ 0.17
CKS2P33552 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CKS2P33552 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.11■□□□□ 0.17
CKS2P33552 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CKS2P33552 AC073130.3-201ENST00000624389 2278 ntBASIC16.11■□□□□ 0.17
CKS2P33552 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.11■□□□□ 0.17
CKS2P33552 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CKS2P33552 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS2P33552 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKS2P33552 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKS2P33552 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKS2P33552 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKS2P33552 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CKS2P33552 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKS2P33552 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKS2P33552 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKS2P33552 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKS2P33552 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKS2P33552 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CKS2P33552 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKS2P33552 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CKS2P33552 AL353803.4-201ENST00000565882 1934 ntBASIC16.09■□□□□ 0.17
CKS2P33552 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS2P33552 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CKS2P33552 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.09■□□□□ 0.17
CKS2P33552 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CKS2P33552 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS2P33552 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS2P33552 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS2P33552 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS2P33552 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.09■□□□□ 0.17
CKS2P33552 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CKS2P33552 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS2P33552 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms