Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL4A5P29400 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL4A5P29400 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL4A5P29400 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.86■■□□□ 1.89
COL4A5P29400 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
COL4A5P29400 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL4A5P29400 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.86■■□□□ 1.89
COL4A5P29400 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.86■■□□□ 1.89
COL4A5P29400 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.86■■□□□ 1.89
COL4A5P29400 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.86■■□□□ 1.89
COL4A5P29400 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL4A5P29400 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
COL4A5P29400 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL4A5P29400 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.85■■□□□ 1.89
COL4A5P29400 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
COL4A5P29400 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL4A5P29400 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
COL4A5P29400 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL4A5P29400 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL4A5P29400 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.85■■□□□ 1.89
COL4A5P29400 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL4A5P29400 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.84■■□□□ 1.89
COL4A5P29400 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.84■■□□□ 1.89
COL4A5P29400 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.84■■□□□ 1.89
COL4A5P29400 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.84■■□□□ 1.89
COL4A5P29400 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.84■■□□□ 1.89
COL4A5P29400 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL4A5P29400 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.84■■□□□ 1.89
COL4A5P29400 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL4A5P29400 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
COL4A5P29400 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
COL4A5P29400 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL4A5P29400 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
COL4A5P29400 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.83■■□□□ 1.89
COL4A5P29400 AC004687.1-201ENST00000579003 1625 ntBASIC26.83■■□□□ 1.89
COL4A5P29400 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
COL4A5P29400 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
COL4A5P29400 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.82■■□□□ 1.88
COL4A5P29400 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.82■■□□□ 1.88
COL4A5P29400 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL4A5P29400 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.82■■□□□ 1.88
COL4A5P29400 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
COL4A5P29400 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL4A5P29400 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.82■■□□□ 1.88
COL4A5P29400 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.82■■□□□ 1.88
COL4A5P29400 AL138781.1-201ENST00000566567 1274 ntBASIC26.82■■□□□ 1.88
COL4A5P29400 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.82■■□□□ 1.88
COL4A5P29400 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL4A5P29400 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
COL4A5P29400 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.81■■□□□ 1.88
COL4A5P29400 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
COL4A5P29400 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 KRT18P11-201ENST00000435214 1283 ntBASIC26.81■■□□□ 1.88
COL4A5P29400 TSPY6P-201ENST00000448518 926 ntBASIC26.81■■□□□ 1.88
COL4A5P29400 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.81■■□□□ 1.88
COL4A5P29400 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.81■■□□□ 1.88
COL4A5P29400 KRT18P6-201ENST00000555540 1265 ntBASIC26.81■■□□□ 1.88
COL4A5P29400 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.81■■□□□ 1.88
COL4A5P29400 AC098934.4-201ENST00000564127 592 ntBASIC26.81■■□□□ 1.88
COL4A5P29400 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.81■■□□□ 1.88
COL4A5P29400 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.81■■□□□ 1.88
COL4A5P29400 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL4A5P29400 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
COL4A5P29400 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.8■■□□□ 1.88
COL4A5P29400 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL4A5P29400 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
COL4A5P29400 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
COL4A5P29400 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.79■■□□□ 1.88
COL4A5P29400 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.79■■□□□ 1.88
COL4A5P29400 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL4A5P29400 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL4A5P29400 AP003733.4-201ENST00000623785 1697 ntBASIC26.78■■□□□ 1.88
COL4A5P29400 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.78■■□□□ 1.88
COL4A5P29400 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
COL4A5P29400 AC079140.4-201ENST00000507448 529 ntBASIC26.78■■□□□ 1.88
COL4A5P29400 DUX4L16-201ENST00000555130 1264 ntBASIC26.78■■□□□ 1.88
COL4A5P29400 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.78■■□□□ 1.88
COL4A5P29400 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL4A5P29400 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL4A5P29400 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms