Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.94■□□□□ 0.78
GDF1P27539 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.94■□□□□ 0.78
GDF1P27539 AC087239.1-201ENST00000622671 572 ntBASIC19.94■□□□□ 0.78
GDF1P27539 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.94■□□□□ 0.78
GDF1P27539 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.94■□□□□ 0.78
GDF1P27539 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDF1P27539 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.93■□□□□ 0.78
GDF1P27539 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GDF1P27539 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GDF1P27539 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.93■□□□□ 0.78
GDF1P27539 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
GDF1P27539 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.93■□□□□ 0.78
GDF1P27539 AC026271.2-201ENST00000428091 497 ntBASIC19.93■□□□□ 0.78
GDF1P27539 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GDF1P27539 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.93■□□□□ 0.78
GDF1P27539 AC068587.7-201ENST00000641602 218 ntBASIC19.93■□□□□ 0.78
GDF1P27539 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDF1P27539 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.93■□□□□ 0.78
GDF1P27539 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GDF1P27539 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
GDF1P27539 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.92■□□□□ 0.78
GDF1P27539 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.92■□□□□ 0.78
GDF1P27539 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDF1P27539 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDF1P27539 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GDF1P27539 AL358852.1-201ENST00000623174 1268 ntBASIC19.92■□□□□ 0.78
GDF1P27539 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDF1P27539 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDF1P27539 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
GDF1P27539 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDF1P27539 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDF1P27539 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDF1P27539 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GDF1P27539 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
GDF1P27539 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.91■□□□□ 0.78
GDF1P27539 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.91■□□□□ 0.78
GDF1P27539 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.91■□□□□ 0.78
GDF1P27539 AC012414.1-201ENST00000556676 535 ntBASIC19.91■□□□□ 0.78
GDF1P27539 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.91■□□□□ 0.78
GDF1P27539 MIR5787-201ENST00000611784 55 ntBASIC19.91■□□□□ 0.78
GDF1P27539 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.91■□□□□ 0.78
GDF1P27539 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GDF1P27539 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GDF1P27539 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GDF1P27539 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.91■□□□□ 0.78
GDF1P27539 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.9■□□□□ 0.78
GDF1P27539 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.9■□□□□ 0.78
GDF1P27539 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.9■□□□□ 0.78
GDF1P27539 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.9■□□□□ 0.78
GDF1P27539 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.9■□□□□ 0.78
GDF1P27539 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.9■□□□□ 0.78
GDF1P27539 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
GDF1P27539 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GDF1P27539 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
GDF1P27539 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.89■□□□□ 0.77
GDF1P27539 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 AC097381.1-201ENST00000429019 1296 ntBASIC19.89■□□□□ 0.77
GDF1P27539 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 AL354811.1-201ENST00000610286 706 ntBASIC19.89■□□□□ 0.77
GDF1P27539 MIR6821-201ENST00000617625 74 ntBASIC19.89■□□□□ 0.77
GDF1P27539 MIR6084-201ENST00000622012 110 ntBASIC19.89■□□□□ 0.77
GDF1P27539 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GDF1P27539 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.88■□□□□ 0.77
GDF1P27539 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.88■□□□□ 0.77
GDF1P27539 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GDF1P27539 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.88■□□□□ 0.77
GDF1P27539 AC105233.4-201ENST00000642045 216 ntBASIC19.88■□□□□ 0.77
GDF1P27539 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.88■□□□□ 0.77
GDF1P27539 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
GDF1P27539 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
GDF1P27539 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms