Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.58■■□□□ 1.05
NELFEP18615 AC136469.2-201ENST00000623944 1028 ntBASIC21.58■■□□□ 1.05
NELFEP18615 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.58■■□□□ 1.05
NELFEP18615 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NELFEP18615 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.58■■□□□ 1.04
NELFEP18615 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.58■■□□□ 1.04
NELFEP18615 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.57■■□□□ 1.04
NELFEP18615 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.57■■□□□ 1.04
NELFEP18615 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFEP18615 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NELFEP18615 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NELFEP18615 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
NELFEP18615 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NELFEP18615 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NELFEP18615 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.55■■□□□ 1.04
NELFEP18615 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NELFEP18615 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
NELFEP18615 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NELFEP18615 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NELFEP18615 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.55■■□□□ 1.04
NELFEP18615 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NELFEP18615 AC105265.2-201ENST00000467189 838 ntBASIC21.55■■□□□ 1.04
NELFEP18615 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.55■■□□□ 1.04
NELFEP18615 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.55■■□□□ 1.04
NELFEP18615 AC027682.1-201ENST00000562846 899 ntBASIC21.55■■□□□ 1.04
NELFEP18615 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.55■■□□□ 1.04
NELFEP18615 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.55■■□□□ 1.04
NELFEP18615 RASA4CP-201ENST00000424092 1398 ntBASIC21.55■■□□□ 1.04
NELFEP18615 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NELFEP18615 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
NELFEP18615 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.55■■□□□ 1.04
NELFEP18615 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.55■■□□□ 1.04
NELFEP18615 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NELFEP18615 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.54■■□□□ 1.04
NELFEP18615 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFEP18615 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.54■■□□□ 1.04
NELFEP18615 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.54■■□□□ 1.04
NELFEP18615 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.54■■□□□ 1.04
NELFEP18615 AC007375.3-201ENST00000600936 2314 ntBASIC21.54■■□□□ 1.04
NELFEP18615 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NELFEP18615 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NELFEP18615 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NELFEP18615 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NELFEP18615 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NELFEP18615 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.53■■□□□ 1.04
NELFEP18615 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.53■■□□□ 1.04
NELFEP18615 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NELFEP18615 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NELFEP18615 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NELFEP18615 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.52■■□□□ 1.04
NELFEP18615 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.52■■□□□ 1.04
NELFEP18615 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.52■■□□□ 1.04
NELFEP18615 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.52■■□□□ 1.04
NELFEP18615 AC008764.7-201ENST00000593779 1081 ntBASIC21.52■■□□□ 1.04
NELFEP18615 pRNA.6-201ENST00000610482 90 ntBASIC21.52■■□□□ 1.04
NELFEP18615 CA15P2-201ENST00000611168 834 ntBASIC21.52■■□□□ 1.04
NELFEP18615 pRNA.5-201ENST00000612139 90 ntBASIC21.52■■□□□ 1.04
NELFEP18615 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
NELFEP18615 pRNA.11-201ENST00000618423 90 ntBASIC21.52■■□□□ 1.04
NELFEP18615 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 pRNA.13-201ENST00000619112 90 ntBASIC21.52■■□□□ 1.04
NELFEP18615 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NELFEP18615 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.52■■□□□ 1.03
NELFEP18615 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NELFEP18615 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NELFEP18615 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFEP18615 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NELFEP18615 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFEP18615 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.51■■□□□ 1.03
NELFEP18615 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms