Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.24■□□□□ 0.83
PEPDP12955 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
PEPDP12955 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.24■□□□□ 0.83
PEPDP12955 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.23■□□□□ 0.83
PEPDP12955 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.23■□□□□ 0.83
PEPDP12955 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 AL136162.1-201ENST00000607711 1078 ntBASIC20.23■□□□□ 0.83
PEPDP12955 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.23■□□□□ 0.83
PEPDP12955 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEPDP12955 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PEPDP12955 AC144652.1-201ENST00000609974 1624 ntBASIC20.23■□□□□ 0.83
PEPDP12955 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PEPDP12955 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEPDP12955 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PEPDP12955 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PEPDP12955 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.22■□□□□ 0.83
PEPDP12955 PBX2P1-201ENST00000493219 1291 ntBASIC20.22■□□□□ 0.83
PEPDP12955 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.22■□□□□ 0.83
PEPDP12955 AC009086.3-201ENST00000623486 1008 ntBASIC20.22■□□□□ 0.83
PEPDP12955 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.22■□□□□ 0.83
PEPDP12955 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEPDP12955 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PEPDP12955 EP400NL-214ENST00000641289 2402 ntBASIC20.22■□□□□ 0.83
PEPDP12955 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PEPDP12955 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEPDP12955 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEPDP12955 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.21■□□□□ 0.83
PEPDP12955 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PEPDP12955 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEPDP12955 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.21■□□□□ 0.83
PEPDP12955 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.21■□□□□ 0.83
PEPDP12955 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PEPDP12955 AL138724.1-201ENST00000606771 1088 ntBASIC20.21■□□□□ 0.83
PEPDP12955 AC106739.1-201ENST00000617035 715 ntBASIC20.21■□□□□ 0.83
PEPDP12955 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEPDP12955 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEPDP12955 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PEPDP12955 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEPDP12955 GUSBP5-202ENST00000510805 1989 ntBASIC20.21■□□□□ 0.83
PEPDP12955 FP325331.1-202ENST00000623531 1380 ntBASIC20.21■□□□□ 0.83
PEPDP12955 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PEPDP12955 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.2■□□□□ 0.82
PEPDP12955 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PEPDP12955 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.2■□□□□ 0.82
PEPDP12955 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 AC133561.4-201ENST00000566112 224 ntBASIC20.2■□□□□ 0.82
PEPDP12955 AC135279.3-201ENST00000610945 1311 ntBASIC20.2■□□□□ 0.82
PEPDP12955 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEPDP12955 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEPDP12955 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PEPDP12955 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.19■□□□□ 0.82
PEPDP12955 MIR638-201ENST00000385237 100 ntBASIC20.19■□□□□ 0.82
PEPDP12955 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEPDP12955 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PEPDP12955 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEPDP12955 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.19■□□□□ 0.82
PEPDP12955 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PEPDP12955 AL353803.4-201ENST00000565882 1934 ntBASIC20.19■□□□□ 0.82
PEPDP12955 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PEPDP12955 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PEPDP12955 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEPDP12955 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.19■□□□□ 0.82
PEPDP12955 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.18■□□□□ 0.82
PEPDP12955 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEPDP12955 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PEPDP12955 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEPDP12955 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PEPDP12955 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.18■□□□□ 0.82
PEPDP12955 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.18■□□□□ 0.82
PEPDP12955 AC006455.2-201ENST00000429931 906 ntBASIC20.18■□□□□ 0.82
PEPDP12955 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEPDP12955 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PEPDP12955 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEPDP12955 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.17■□□□□ 0.82
PEPDP12955 LINC01529-204ENST00000636474 1715 ntBASIC20.17■□□□□ 0.82
PEPDP12955 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEPDP12955 SERBP1P1-201ENST00000396021 1160 ntBASIC20.17■□□□□ 0.82
PEPDP12955 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.17■□□□□ 0.82
PEPDP12955 AC024257.2-201ENST00000549699 147 ntBASIC20.17■□□□□ 0.82
PEPDP12955 AC011298.3-201ENST00000615796 283 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms