Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.88■□□□□ 0.77
HMGN1P05114 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
HMGN1P05114 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HMGN1P05114 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HMGN1P05114 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.87■□□□□ 0.77
HMGN1P05114 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HMGN1P05114 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGN1P05114 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGN1P05114 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGN1P05114 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGN1P05114 FBXW4P1-201ENST00000426721 2239 ntBASIC19.86■□□□□ 0.77
HMGN1P05114 AC137630.3-201ENST00000607245 391 ntBASIC19.86■□□□□ 0.77
HMGN1P05114 MIR6722-201ENST00000617286 78 ntBASIC19.86■□□□□ 0.77
HMGN1P05114 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HMGN1P05114 AC009086.3-201ENST00000623486 1008 ntBASIC19.86■□□□□ 0.77
HMGN1P05114 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGN1P05114 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGN1P05114 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGN1P05114 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HMGN1P05114 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGN1P05114 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGN1P05114 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 AL024507.2-201ENST00000606070 2574 ntBASIC19.85■□□□□ 0.77
HMGN1P05114 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGN1P05114 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.85■□□□□ 0.77
HMGN1P05114 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HMGN1P05114 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGN1P05114 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGN1P05114 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGN1P05114 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGN1P05114 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HMGN1P05114 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HMGN1P05114 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGN1P05114 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGN1P05114 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGN1P05114 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGN1P05114 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.83■□□□□ 0.77
HMGN1P05114 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.83■□□□□ 0.77
HMGN1P05114 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGN1P05114 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
HMGN1P05114 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HMGN1P05114 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGN1P05114 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.83■□□□□ 0.76
HMGN1P05114 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGN1P05114 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HMGN1P05114 LINC01960-201ENST00000563759 1884 ntBASIC19.82■□□□□ 0.76
HMGN1P05114 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGN1P05114 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 YBX1P4-201ENST00000392794 808 ntBASIC19.82■□□□□ 0.76
HMGN1P05114 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 DUX4L4-201ENST00000566884 1269 ntBASIC19.82■□□□□ 0.76
HMGN1P05114 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGN1P05114 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGN1P05114 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HMGN1P05114 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HMGN1P05114 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGN1P05114 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGN1P05114 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGN1P05114 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGN1P05114 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGN1P05114 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGN1P05114 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.81■□□□□ 0.76
HMGN1P05114 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGN1P05114 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
HMGN1P05114 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGN1P05114 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGN1P05114 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HMGN1P05114 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms