Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHGBP05060 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHGBP05060 AC091305.1-201ENST00000479476 895 ntBASIC26.57■■□□□ 1.84
CHGBP05060 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHGBP05060 RASA4CP-201ENST00000424092 1398 ntBASIC26.57■■□□□ 1.84
CHGBP05060 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CHGBP05060 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.56■■□□□ 1.84
CHGBP05060 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.56■■□□□ 1.84
CHGBP05060 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.56■■□□□ 1.84
CHGBP05060 AC027682.1-201ENST00000562846 899 ntBASIC26.56■■□□□ 1.84
CHGBP05060 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.56■■□□□ 1.84
CHGBP05060 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHGBP05060 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.56■■□□□ 1.84
CHGBP05060 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CHGBP05060 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CHGBP05060 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.55■■□□□ 1.84
CHGBP05060 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CHGBP05060 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.55■■□□□ 1.84
CHGBP05060 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CHGBP05060 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.55■■□□□ 1.84
CHGBP05060 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.55■■□□□ 1.84
CHGBP05060 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CHGBP05060 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHGBP05060 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.55■■□□□ 1.84
CHGBP05060 AC133561.1-201ENST00000568600 2415 ntBASIC26.55■■□□□ 1.84
CHGBP05060 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.54■■□□□ 1.84
CHGBP05060 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.54■■□□□ 1.84
CHGBP05060 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.54■■□□□ 1.84
CHGBP05060 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.54■■□□□ 1.84
CHGBP05060 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.54■■□□□ 1.84
CHGBP05060 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHGBP05060 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHGBP05060 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.53■■□□□ 1.84
CHGBP05060 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHGBP05060 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHGBP05060 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.53■■□□□ 1.84
CHGBP05060 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.53■■□□□ 1.84
CHGBP05060 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHGBP05060 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.53■■□□□ 1.84
CHGBP05060 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHGBP05060 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHGBP05060 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHGBP05060 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.52■■□□□ 1.84
CHGBP05060 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.52■■□□□ 1.84
CHGBP05060 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CHGBP05060 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHGBP05060 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHGBP05060 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CHGBP05060 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHGBP05060 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
CHGBP05060 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHGBP05060 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.51■■□□□ 1.83
CHGBP05060 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.51■■□□□ 1.83
CHGBP05060 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.51■■□□□ 1.83
CHGBP05060 AC087742.1-201ENST00000575880 1738 ntBASIC26.51■■□□□ 1.83
CHGBP05060 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CHGBP05060 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHGBP05060 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHGBP05060 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHGBP05060 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHGBP05060 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.5■■□□□ 1.83
CHGBP05060 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.5■■□□□ 1.83
CHGBP05060 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.5■■□□□ 1.83
CHGBP05060 AC126544.1-201ENST00000580842 1059 ntBASIC26.5■■□□□ 1.83
CHGBP05060 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
CHGBP05060 AL031602.1-201ENST00000633169 911 ntBASIC26.5■■□□□ 1.83
CHGBP05060 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.5■■□□□ 1.83
CHGBP05060 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHGBP05060 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHGBP05060 AC068473.5-201ENST00000616428 2072 ntBASIC26.5■■□□□ 1.83
CHGBP05060 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHGBP05060 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHGBP05060 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
CHGBP05060 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.49■■□□□ 1.83
CHGBP05060 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHGBP05060 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHGBP05060 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHGBP05060 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHGBP05060 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHGBP05060 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHGBP05060 TSPY26P-201ENST00000476365 1326 ntBASIC26.48■■□□□ 1.83
CHGBP05060 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHGBP05060 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.48■■□□□ 1.83
CHGBP05060 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms