Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE6O95741 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 ABCB10P4-201ENST00000566803 2184 ntBASIC21.53■■□□□ 1.04
CPNE6O95741 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE6O95741 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
CPNE6O95741 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.52■■□□□ 1.04
CPNE6O95741 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE6O95741 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE6O95741 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE6O95741 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.52■■□□□ 1.04
CPNE6O95741 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.52■■□□□ 1.04
CPNE6O95741 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CPNE6O95741 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE6O95741 IGHV3-19-201ENST00000521488 291 ntBASIC21.52■■□□□ 1.04
CPNE6O95741 DUX4L4-201ENST00000566884 1269 ntBASIC21.52■■□□□ 1.04
CPNE6O95741 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE6O95741 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CPNE6O95741 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CPNE6O95741 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE6O95741 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE6O95741 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE6O95741 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CPNE6O95741 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.51■■□□□ 1.03
CPNE6O95741 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.51■■□□□ 1.03
CPNE6O95741 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.51■■□□□ 1.03
CPNE6O95741 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE6O95741 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CPNE6O95741 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE6O95741 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.5■■□□□ 1.03
CPNE6O95741 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CPNE6O95741 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE6O95741 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.5■■□□□ 1.03
CPNE6O95741 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE6O95741 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.5■■□□□ 1.03
CPNE6O95741 LINC00565-201ENST00000562710 2331 ntBASIC21.5■■□□□ 1.03
CPNE6O95741 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE6O95741 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CPNE6O95741 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CPNE6O95741 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.49■■□□□ 1.03
CPNE6O95741 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 YBX1P1-201ENST00000445822 960 ntBASIC21.49■■□□□ 1.03
CPNE6O95741 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
CPNE6O95741 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.49■■□□□ 1.03
CPNE6O95741 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE6O95741 AL358852.1-201ENST00000623174 1268 ntBASIC21.49■■□□□ 1.03
CPNE6O95741 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE6O95741 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CPNE6O95741 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE6O95741 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPNE6O95741 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 AC144652.1-201ENST00000609974 1624 ntBASIC21.48■■□□□ 1.03
CPNE6O95741 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE6O95741 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE6O95741 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 AC034268.1-201ENST00000441047 882 ntBASIC21.48■■□□□ 1.03
CPNE6O95741 OR2I1P-207ENST00000453522 948 ntBASIC21.48■■□□□ 1.03
CPNE6O95741 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE6O95741 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE6O95741 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 LINC01529-204ENST00000636474 1715 ntBASIC21.48■■□□□ 1.03
CPNE6O95741 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPNE6O95741 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPNE6O95741 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE6O95741 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPNE6O95741 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE6O95741 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.47■■□□□ 1.03
CPNE6O95741 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.47■■□□□ 1.03
CPNE6O95741 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.47■■□□□ 1.03
CPNE6O95741 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE6O95741 MIR572-201ENST00000384983 95 ntBASIC21.47■■□□□ 1.03
CPNE6O95741 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE6O95741 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.47■■□□□ 1.03
CPNE6O95741 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms