Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX6O95475 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX6O95475 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX6O95475 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SIX6O95475 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX6O95475 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX6O95475 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX6O95475 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX6O95475 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX6O95475 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX6O95475 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX6O95475 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SIX6O95475 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.36■□□□□ 0.53
SIX6O95475 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX6O95475 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX6O95475 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX6O95475 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.36■□□□□ 0.53
SIX6O95475 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX6O95475 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX6O95475 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX6O95475 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX6O95475 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX6O95475 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SIX6O95475 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX6O95475 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIX6O95475 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX6O95475 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 LINC01521-201ENST00000504184 1943 ntBASIC18.34■□□□□ 0.53
SIX6O95475 AL353803.4-201ENST00000565882 1934 ntBASIC18.34■□□□□ 0.53
SIX6O95475 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SIX6O95475 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX6O95475 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX6O95475 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SIX6O95475 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SIX6O95475 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SIX6O95475 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
SIX6O95475 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 KRT18P10-201ENST00000388836 1287 ntBASIC18.33■□□□□ 0.52
SIX6O95475 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 RP9P-202ENST00000450133 1212 ntBASIC18.33■□□□□ 0.52
SIX6O95475 AC093536.1-201ENST00000569153 554 ntBASIC18.33■□□□□ 0.52
SIX6O95475 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SIX6O95475 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.33■□□□□ 0.52
SIX6O95475 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX6O95475 AF106564.1-201ENST00000607058 2553 ntBASIC18.33■□□□□ 0.52
SIX6O95475 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
SIX6O95475 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 AC007952.6-201ENST00000573168 2673 ntBASIC18.32■□□□□ 0.52
SIX6O95475 AC003957.1-201ENST00000625108 2673 ntBASIC18.32■□□□□ 0.52
SIX6O95475 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
SIX6O95475 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.32■□□□□ 0.52
SIX6O95475 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.32■□□□□ 0.52
SIX6O95475 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.32■□□□□ 0.52
SIX6O95475 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.32■□□□□ 0.52
SIX6O95475 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SIX6O95475 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX6O95475 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX6O95475 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.31■□□□□ 0.52
SIX6O95475 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SIX6O95475 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX6O95475 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIX6O95475 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX6O95475 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SIX6O95475 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIX6O95475 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIX6O95475 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX6O95475 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms