Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX2O60749 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SNX2O60749 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.95■■□□□ 1.1
SNX2O60749 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.95■■□□□ 1.1
SNX2O60749 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.95■■□□□ 1.1
SNX2O60749 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
SNX2O60749 MIR3181-201ENST00000578512 73 ntBASIC21.95■■□□□ 1.1
SNX2O60749 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.95■■□□□ 1.1
SNX2O60749 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.95■■□□□ 1.1
SNX2O60749 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.95■■□□□ 1.1
SNX2O60749 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SNX2O60749 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
SNX2O60749 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX2O60749 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SNX2O60749 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SNX2O60749 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SNX2O60749 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.94■■□□□ 1.1
SNX2O60749 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 C1orf229-201ENST00000623686 2258 ntBASIC21.94■■□□□ 1.1
SNX2O60749 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.94■■□□□ 1.1
SNX2O60749 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.94■■□□□ 1.1
SNX2O60749 AL355001.2-201ENST00000620617 1191 ntBASIC21.94■■□□□ 1.1
SNX2O60749 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
SNX2O60749 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SNX2O60749 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX2O60749 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SNX2O60749 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SNX2O60749 EDA-201ENST00000338901 1233 ntBASIC21.93■■□□□ 1.1
SNX2O60749 AC233723.2-201ENST00000623798 2106 ntBASIC21.92■■□□□ 1.1
SNX2O60749 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.92■■□□□ 1.1
SNX2O60749 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 AL138724.1-201ENST00000606771 1088 ntBASIC21.92■■□□□ 1.1
SNX2O60749 AL031432.3-201ENST00000607698 485 ntBASIC21.92■■□□□ 1.1
SNX2O60749 AC011298.3-201ENST00000615796 283 ntBASIC21.92■■□□□ 1.1
SNX2O60749 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.92■■□□□ 1.1
SNX2O60749 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SNX2O60749 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX2O60749 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX2O60749 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SNX2O60749 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX2O60749 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNX2O60749 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNX2O60749 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.91■■□□□ 1.1
SNX2O60749 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX2O60749 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX2O60749 AL353803.4-201ENST00000565882 1934 ntBASIC21.91■■□□□ 1.1
SNX2O60749 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.91■■□□□ 1.1
SNX2O60749 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX2O60749 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SNX2O60749 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX2O60749 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNX2O60749 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SNX2O60749 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX2O60749 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.9■■□□□ 1.1
SNX2O60749 AF213884.3-201ENST00000563833 479 ntBASIC21.9■■□□□ 1.1
SNX2O60749 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.9■■□□□ 1.1
SNX2O60749 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SNX2O60749 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNX2O60749 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.9■■□□□ 1.1
SNX2O60749 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX2O60749 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SNX2O60749 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 SUDS3P1-201ENST00000505831 966 ntBASIC21.89■■□□□ 1.09
SNX2O60749 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SNX2O60749 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.89■■□□□ 1.09
SNX2O60749 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.89■■□□□ 1.09
SNX2O60749 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.89■■□□□ 1.09
SNX2O60749 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
SNX2O60749 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNX2O60749 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.89■■□□□ 1.09
SNX2O60749 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX2O60749 AL117328.2-201ENST00000624617 1940 ntBASIC21.88■■□□□ 1.09
SNX2O60749 AC144652.1-201ENST00000609974 1624 ntBASIC21.88■■□□□ 1.09
SNX2O60749 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms