Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC241585.3-202ENST00000628937 1088 ntBASIC20.98■□□□□ 0.95
PCDH7O60245 AC245100.8-202ENST00000629247 1058 ntBASIC20.98■□□□□ 0.95
PCDH7O60245 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH7O60245 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH7O60245 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
PCDH7O60245 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH7O60245 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH7O60245 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PCDH7O60245 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH7O60245 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH7O60245 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
PCDH7O60245 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH7O60245 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH7O60245 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH7O60245 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH7O60245 AL499627.2-201ENST00000606283 725 ntBASIC20.97■□□□□ 0.95
PCDH7O60245 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH7O60245 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDH7O60245 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH7O60245 AC080038.3-201ENST00000623346 1952 ntBASIC20.96■□□□□ 0.95
PCDH7O60245 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH7O60245 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH7O60245 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH7O60245 LINC00565-201ENST00000562710 2331 ntBASIC20.96■□□□□ 0.95
PCDH7O60245 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH7O60245 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH7O60245 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH7O60245 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH7O60245 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH7O60245 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDH7O60245 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 AL356441.2-201ENST00000443009 864 ntBASIC20.95■□□□□ 0.94
PCDH7O60245 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PCDH7O60245 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH7O60245 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH7O60245 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PCDH7O60245 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 AC139530.1-201ENST00000575312 1977 ntBASIC20.94■□□□□ 0.94
PCDH7O60245 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH7O60245 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH7O60245 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDH7O60245 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH7O60245 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH7O60245 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDH7O60245 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH7O60245 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH7O60245 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH7O60245 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH7O60245 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH7O60245 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH7O60245 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH7O60245 AC006455.2-201ENST00000429931 906 ntBASIC20.93■□□□□ 0.94
PCDH7O60245 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDH7O60245 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH7O60245 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.93■□□□□ 0.94
PCDH7O60245 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH7O60245 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH7O60245 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.93■□□□□ 0.94
PCDH7O60245 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH7O60245 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH7O60245 AC099791.2-201ENST00000605725 427 ntBASIC20.92■□□□□ 0.94
PCDH7O60245 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH7O60245 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH7O60245 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH7O60245 CLDN5-201ENST00000403084 2357 ntBASIC20.92■□□□□ 0.94
PCDH7O60245 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH7O60245 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH7O60245 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH7O60245 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH7O60245 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms