Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PRICKLE3O43900 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRICKLE3O43900 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.18■□□□□ 0.98
PRICKLE3O43900 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE3O43900 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.18■□□□□ 0.98
PRICKLE3O43900 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PRICKLE3O43900 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
PRICKLE3O43900 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE3O43900 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE3O43900 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE3O43900 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE3O43900 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE3O43900 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRICKLE3O43900 C9orf163-202ENST00000624034 2573 ntBASIC21.17■□□□□ 0.98
PRICKLE3O43900 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE3O43900 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE3O43900 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE3O43900 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE3O43900 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE3O43900 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE3O43900 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
PRICKLE3O43900 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE3O43900 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE3O43900 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE3O43900 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE3O43900 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE3O43900 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE3O43900 AC068587.7-201ENST00000641602 218 ntBASIC21.15■□□□□ 0.98
PRICKLE3O43900 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRICKLE3O43900 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRICKLE3O43900 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRICKLE3O43900 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRICKLE3O43900 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRICKLE3O43900 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.14■□□□□ 0.97
PRICKLE3O43900 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.14■□□□□ 0.97
PRICKLE3O43900 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.14■□□□□ 0.97
PRICKLE3O43900 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.14■□□□□ 0.97
PRICKLE3O43900 AC126544.1-201ENST00000580842 1059 ntBASIC21.14■□□□□ 0.97
PRICKLE3O43900 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRICKLE3O43900 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.14■□□□□ 0.97
PRICKLE3O43900 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PRICKLE3O43900 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRICKLE3O43900 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRICKLE3O43900 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRICKLE3O43900 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRICKLE3O43900 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.13■□□□□ 0.97
PRICKLE3O43900 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRICKLE3O43900 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
PRICKLE3O43900 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRICKLE3O43900 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRICKLE3O43900 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.13■□□□□ 0.97
PRICKLE3O43900 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRICKLE3O43900 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRICKLE3O43900 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRICKLE3O43900 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRICKLE3O43900 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRICKLE3O43900 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PRICKLE3O43900 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRICKLE3O43900 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 LINC01960-201ENST00000563759 1884 ntBASIC21.11■□□□□ 0.97
PRICKLE3O43900 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 IGHV3-19-201ENST00000521488 291 ntBASIC21.11■□□□□ 0.97
PRICKLE3O43900 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 AC087742.1-201ENST00000575880 1738 ntBASIC21.11■□□□□ 0.97
PRICKLE3O43900 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRICKLE3O43900 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.11■□□□□ 0.97
PRICKLE3O43900 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.1■□□□□ 0.97
PRICKLE3O43900 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms