Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
XRCC2O43543 AC092171.4-201ENST00000609130 632 ntBASIC19.05■□□□□ 0.64
XRCC2O43543 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.05■□□□□ 0.64
XRCC2O43543 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC2O43543 SRD5A1P1-201ENST00000442297 786 ntBASIC19.04■□□□□ 0.64
XRCC2O43543 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
XRCC2O43543 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC2O43543 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.04■□□□□ 0.64
XRCC2O43543 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC2O43543 AC242852.2-201ENST00000615738 1807 ntBASIC19.04■□□□□ 0.64
XRCC2O43543 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC2O43543 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.04■□□□□ 0.64
XRCC2O43543 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC2O43543 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC2O43543 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC2O43543 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC2O43543 LINC01960-201ENST00000563759 1884 ntBASIC19.03■□□□□ 0.64
XRCC2O43543 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC2O43543 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
XRCC2O43543 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
XRCC2O43543 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC2O43543 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC2O43543 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC2O43543 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC2O43543 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC2O43543 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC2O43543 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.03■□□□□ 0.64
XRCC2O43543 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.03■□□□□ 0.64
XRCC2O43543 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC2O43543 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC2O43543 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC2O43543 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
XRCC2O43543 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC2O43543 ECEL1P1-201ENST00000373592 1742 ntBASIC19.03■□□□□ 0.64
XRCC2O43543 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.02■□□□□ 0.64
XRCC2O43543 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
XRCC2O43543 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.02■□□□□ 0.64
XRCC2O43543 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
XRCC2O43543 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.02■□□□□ 0.64
XRCC2O43543 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC2O43543 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.02■□□□□ 0.64
XRCC2O43543 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
XRCC2O43543 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
XRCC2O43543 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
XRCC2O43543 AC087742.1-201ENST00000575880 1738 ntBASIC19.01■□□□□ 0.63
XRCC2O43543 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.01■□□□□ 0.63
XRCC2O43543 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC2O43543 AL512631.2-201ENST00000604634 923 ntBASIC19.01■□□□□ 0.63
XRCC2O43543 AC099791.2-201ENST00000605725 427 ntBASIC19.01■□□□□ 0.63
XRCC2O43543 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC2O43543 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC2O43543 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
XRCC2O43543 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19■□□□□ 0.63
XRCC2O43543 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19■□□□□ 0.63
XRCC2O43543 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC2O43543 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC2O43543 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19■□□□□ 0.63
XRCC2O43543 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19■□□□□ 0.63
XRCC2O43543 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19■□□□□ 0.63
XRCC2O43543 RASSF1-AS1-201ENST00000629828 790 ntBASIC19■□□□□ 0.63
XRCC2O43543 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
XRCC2O43543 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19■□□□□ 0.63
XRCC2O43543 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC2O43543 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19■□□□□ 0.63
XRCC2O43543 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19■□□□□ 0.63
XRCC2O43543 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.99■□□□□ 0.63
XRCC2O43543 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 pRNA.6-201ENST00000610482 90 ntBASIC18.99■□□□□ 0.63
XRCC2O43543 pRNA.5-201ENST00000612139 90 ntBASIC18.99■□□□□ 0.63
XRCC2O43543 pRNA.11-201ENST00000618423 90 ntBASIC18.99■□□□□ 0.63
XRCC2O43543 pRNA.13-201ENST00000619112 90 ntBASIC18.99■□□□□ 0.63
XRCC2O43543 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.99■□□□□ 0.63
XRCC2O43543 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms