Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 MIR6724-3-201ENST00000622482 92 ntBASIC20.21■□□□□ 0.83
ARHGEF9O43307 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF9O43307 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ARHGEF9O43307 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.19■□□□□ 0.82
ARHGEF9O43307 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ARHGEF9O43307 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 DUSP8P3-201ENST00000399571 1760 ntBASIC20.19■□□□□ 0.82
ARHGEF9O43307 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.19■□□□□ 0.82
ARHGEF9O43307 MIR3621-201ENST00000580529 85 ntBASIC20.19■□□□□ 0.82
ARHGEF9O43307 AC005837.3-201ENST00000612163 286 ntBASIC20.19■□□□□ 0.82
ARHGEF9O43307 AL117332.1-201ENST00000622628 974 ntBASIC20.19■□□□□ 0.82
ARHGEF9O43307 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF9O43307 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.19■□□□□ 0.82
ARHGEF9O43307 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF9O43307 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF9O43307 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ARHGEF9O43307 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
ARHGEF9O43307 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.18■□□□□ 0.82
ARHGEF9O43307 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF9O43307 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ARHGEF9O43307 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF9O43307 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF9O43307 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGEF9O43307 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 C1orf229-201ENST00000623686 2258 ntBASIC20.16■□□□□ 0.82
ARHGEF9O43307 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF9O43307 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF9O43307 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF9O43307 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF9O43307 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF9O43307 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
ARHGEF9O43307 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF9O43307 AC096631.2-201ENST00000436136 790 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms