Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 AC137630.3-201ENST00000607245 391 ntBASIC21.26■□□□□ 0.99
SDHDO14521 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.26■□□□□ 0.99
SDHDO14521 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SDHDO14521 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.25■□□□□ 0.99
SDHDO14521 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SDHDO14521 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.25■□□□□ 0.99
SDHDO14521 AC103724.3-201ENST00000564481 992 ntBASIC21.25■□□□□ 0.99
SDHDO14521 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SDHDO14521 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.25■□□□□ 0.99
SDHDO14521 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SDHDO14521 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SDHDO14521 AC005703.6-201ENST00000623265 1329 ntBASIC21.25■□□□□ 0.99
SDHDO14521 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SDHDO14521 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SDHDO14521 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHDO14521 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHDO14521 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHDO14521 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.24■□□□□ 0.99
SDHDO14521 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHDO14521 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SDHDO14521 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
SDHDO14521 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SDHDO14521 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SDHDO14521 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.24■□□□□ 0.99
SDHDO14521 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHDO14521 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SDHDO14521 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHDO14521 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SDHDO14521 DUX4L4-201ENST00000566884 1269 ntBASIC21.23■□□□□ 0.99
SDHDO14521 MIR6722-201ENST00000617286 78 ntBASIC21.23■□□□□ 0.99
SDHDO14521 AC009086.3-201ENST00000623486 1008 ntBASIC21.23■□□□□ 0.99
SDHDO14521 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.23■□□□□ 0.99
SDHDO14521 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHDO14521 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHDO14521 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SDHDO14521 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.22■□□□□ 0.99
SDHDO14521 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.22■□□□□ 0.99
SDHDO14521 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.22■□□□□ 0.99
SDHDO14521 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SDHDO14521 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.22■□□□□ 0.99
SDHDO14521 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SDHDO14521 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.22■□□□□ 0.99
SDHDO14521 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHDO14521 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.21■□□□□ 0.99
SDHDO14521 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.21■□□□□ 0.99
SDHDO14521 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.21■□□□□ 0.99
SDHDO14521 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SDHDO14521 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.21■□□□□ 0.99
SDHDO14521 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SDHDO14521 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.21■□□□□ 0.99
SDHDO14521 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SDHDO14521 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
SDHDO14521 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHDO14521 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SDHDO14521 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SDHDO14521 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
SDHDO14521 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.2■□□□□ 0.98
SDHDO14521 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
SDHDO14521 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.2■□□□□ 0.98
SDHDO14521 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.2■□□□□ 0.98
SDHDO14521 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.2■□□□□ 0.98
SDHDO14521 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.2■□□□□ 0.98
SDHDO14521 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHDO14521 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms