Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPB1O00241 AL356740.2-201ENST00000601559 647 ntBASIC18.54■□□□□ 0.56
SIRPB1O00241 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SIRPB1O00241 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.54■□□□□ 0.56
SIRPB1O00241 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.53■□□□□ 0.56
SIRPB1O00241 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SIRPB1O00241 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.53■□□□□ 0.56
SIRPB1O00241 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIRPB1O00241 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SIRPB1O00241 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SIRPB1O00241 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.52■□□□□ 0.56
SIRPB1O00241 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIRPB1O00241 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIRPB1O00241 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIRPB1O00241 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIRPB1O00241 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIRPB1O00241 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.51■□□□□ 0.55
SIRPB1O00241 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
SIRPB1O00241 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIRPB1O00241 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SIRPB1O00241 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIRPB1O00241 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIRPB1O00241 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SIRPB1O00241 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.51■□□□□ 0.55
SIRPB1O00241 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.51■□□□□ 0.55
SIRPB1O00241 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIRPB1O00241 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIRPB1O00241 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.51■□□□□ 0.55
SIRPB1O00241 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SIRPB1O00241 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIRPB1O00241 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SIRPB1O00241 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIRPB1O00241 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIRPB1O00241 ECEL1P1-201ENST00000373592 1742 ntBASIC18.5■□□□□ 0.55
SIRPB1O00241 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIRPB1O00241 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIRPB1O00241 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.5■□□□□ 0.55
SIRPB1O00241 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.5■□□□□ 0.55
SIRPB1O00241 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIRPB1O00241 AC127496.7-201ENST00000625110 1798 ntBASIC18.5■□□□□ 0.55
SIRPB1O00241 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SIRPB1O00241 LINC00526-201ENST00000581067 1875 ntBASIC18.5■□□□□ 0.55
SIRPB1O00241 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 AC087742.1-201ENST00000575880 1738 ntBASIC18.49■□□□□ 0.55
SIRPB1O00241 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 AC242852.2-201ENST00000615738 1807 ntBASIC18.49■□□□□ 0.55
SIRPB1O00241 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
SIRPB1O00241 AL356441.2-201ENST00000443009 864 ntBASIC18.49■□□□□ 0.55
SIRPB1O00241 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 LINC01960-201ENST00000563759 1884 ntBASIC18.49■□□□□ 0.55
SIRPB1O00241 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.49■□□□□ 0.55
SIRPB1O00241 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.49■□□□□ 0.55
SIRPB1O00241 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.49■□□□□ 0.55
SIRPB1O00241 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.49■□□□□ 0.55
SIRPB1O00241 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIRPB1O00241 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SIRPB1O00241 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SIRPB1O00241 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.48■□□□□ 0.55
SIRPB1O00241 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.48■□□□□ 0.55
SIRPB1O00241 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.48■□□□□ 0.55
SIRPB1O00241 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.48■□□□□ 0.55
SIRPB1O00241 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 MIR3621-201ENST00000580529 85 ntBASIC18.48■□□□□ 0.55
SIRPB1O00241 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SIRPB1O00241 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms