Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA2E9PIF3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 OR2I1P-207ENST00000453522 948 ntBASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA2E9PIF3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPA2E9PIF3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 MIR572-201ENST00000384983 95 ntBASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPA2E9PIF3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 MIR6084-201ENST00000622012 110 ntBASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 AL358852.1-201ENST00000623174 1268 ntBASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPA2E9PIF3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 YBX1P1-201ENST00000445822 960 ntBASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms