Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SPDYE4A6NLX3 PKD1P6-201ENST00000343738 4769 ntBASIC24.46■■□□□ 1.51
SPDYE4A6NLX3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SPDYE4A6NLX3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SPDYE4A6NLX3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SPDYE4A6NLX3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SPDYE4A6NLX3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SPDYE4A6NLX3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.45■■□□□ 1.51
SPDYE4A6NLX3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 AC073130.3-201ENST00000624389 2278 ntBASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 DUX4L19-201ENST00000557448 1267 ntBASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 GUSBP5-202ENST00000510805 1989 ntBASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.45■■□□□ 1.5
SPDYE4A6NLX3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 AC004448.1-201ENST00000458332 883 ntBASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 SUDS3P1-201ENST00000505831 966 ntBASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 SLC6A10P-202ENST00000431994 2058 ntBASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE4A6NLX3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 AC105265.2-201ENST00000467189 838 ntBASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SPDYE4A6NLX3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 AL031432.3-201ENST00000607698 485 ntBASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 MIR5787-201ENST00000611784 55 ntBASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 SYT6-210ENST00000641643 1587 ntBASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SPDYE4A6NLX3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 AF213884.3-201ENST00000563833 479 ntBASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 AC092171.4-201ENST00000609130 632 ntBASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
SPDYE4A6NLX3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.4■■□□□ 1.5
SPDYE4A6NLX3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPDYE4A6NLX3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
SPDYE4A6NLX3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPDYE4A6NLX3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.39■■□□□ 1.49
SPDYE4A6NLX3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SPDYE4A6NLX3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.38■■□□□ 1.49
SPDYE4A6NLX3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms