Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCP4L1A6NKN8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 AC005229.4-201ENST00000610085 2198 ntBASIC17.35■□□□□ 0.37
PCP4L1A6NKN8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCP4L1A6NKN8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PCP4L1A6NKN8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCP4L1A6NKN8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCP4L1A6NKN8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.31■□□□□ 0.36
PCP4L1A6NKN8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms