Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.52■■■□□ 2.32
RTL1A6NKG5 AL353803.4-201ENST00000565882 1934 ntBASIC29.52■■■□□ 2.32
RTL1A6NKG5 AC006015.1-201ENST00000429970 570 ntBASIC29.52■■■□□ 2.32
RTL1A6NKG5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.52■■■□□ 2.32
RTL1A6NKG5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.52■■■□□ 2.32
RTL1A6NKG5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
RTL1A6NKG5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.32
RTL1A6NKG5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
RTL1A6NKG5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL1A6NKG5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL1A6NKG5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL1A6NKG5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.51■■■□□ 2.31
RTL1A6NKG5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.51■■■□□ 2.31
RTL1A6NKG5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL1A6NKG5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RTL1A6NKG5 AC010141.3-201ENST00000456659 717 ntBASIC29.51■■■□□ 2.31
RTL1A6NKG5 AC087239.1-201ENST00000622671 572 ntBASIC29.51■■■□□ 2.31
RTL1A6NKG5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL1A6NKG5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.5■■■□□ 2.31
RTL1A6NKG5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTL1A6NKG5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC29.5■■■□□ 2.31
RTL1A6NKG5 SMUG1P1-201ENST00000590640 811 ntBASIC29.5■■■□□ 2.31
RTL1A6NKG5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTL1A6NKG5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.49■■■□□ 2.31
RTL1A6NKG5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.49■■■□□ 2.31
RTL1A6NKG5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTL1A6NKG5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTL1A6NKG5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.49■■■□□ 2.31
RTL1A6NKG5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
RTL1A6NKG5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.49■■■□□ 2.31
RTL1A6NKG5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTL1A6NKG5 BX005040.4-201ENST00000637145 1518 ntBASIC29.48■■■□□ 2.31
RTL1A6NKG5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC29.48■■■□□ 2.31
RTL1A6NKG5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.48■■■□□ 2.31
RTL1A6NKG5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
RTL1A6NKG5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RTL1A6NKG5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RTL1A6NKG5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC29.47■■■□□ 2.31
RTL1A6NKG5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.47■■■□□ 2.31
RTL1A6NKG5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.47■■■□□ 2.31
RTL1A6NKG5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.47■■■□□ 2.31
RTL1A6NKG5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RTL1A6NKG5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RTL1A6NKG5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RTL1A6NKG5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
RTL1A6NKG5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.46■■■□□ 2.31
RTL1A6NKG5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
RTL1A6NKG5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
RTL1A6NKG5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RTL1A6NKG5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC29.45■■■□□ 2.3
RTL1A6NKG5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
RTL1A6NKG5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC29.44■■■□□ 2.3
RTL1A6NKG5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
RTL1A6NKG5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL1A6NKG5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL1A6NKG5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL1A6NKG5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RTL1A6NKG5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC29.43■■■□□ 2.3
RTL1A6NKG5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
RTL1A6NKG5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.43■■■□□ 2.3
RTL1A6NKG5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RTL1A6NKG5 AC004854.2-201ENST00000608450 1441 ntBASIC29.42■■■□□ 2.3
RTL1A6NKG5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RTL1A6NKG5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTL1A6NKG5 AP004607.4-201ENST00000530158 1459 ntBASIC29.42■■■□□ 2.3
RTL1A6NKG5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RTL1A6NKG5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC29.41■■■□□ 2.3
RTL1A6NKG5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RTL1A6NKG5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC29.41■■■□□ 2.3
RTL1A6NKG5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.41■■■□□ 2.3
RTL1A6NKG5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.41■■■□□ 2.3
RTL1A6NKG5 RAP2CP1-201ENST00000605103 478 ntBASIC29.41■■■□□ 2.3
RTL1A6NKG5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.41■■■□□ 2.3
RTL1A6NKG5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RTL1A6NKG5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
RTL1A6NKG5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
RTL1A6NKG5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.4■■■□□ 2.3
RTL1A6NKG5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.4■■■□□ 2.3
RTL1A6NKG5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
RTL1A6NKG5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC29.4■■■□□ 2.3
RTL1A6NKG5 ABCB10P4-201ENST00000566803 2184 ntBASIC29.4■■■□□ 2.3
RTL1A6NKG5 ID1-201ENST00000376105 1233 ntBASIC29.39■■■□□ 2.3
RTL1A6NKG5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RTL1A6NKG5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC29.39■■■□□ 2.3
RTL1A6NKG5 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.39■■■□□ 2.3
RTL1A6NKG5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.39■■■□□ 2.3
RTL1A6NKG5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
RTL1A6NKG5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RTL1A6NKG5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RTL1A6NKG5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC29.39■■■□□ 2.3
RTL1A6NKG5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RTL1A6NKG5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC29.39■■■□□ 2.29
RTL1A6NKG5 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.39■■■□□ 2.29
RTL1A6NKG5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.39■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms