Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 AC142086.6-201ENST00000621154 1765 ntBASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM88BA6NKF7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 AL158047.1-201ENST00000445918 881 ntBASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM88BA6NKF7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 MYCNOS-205ENST00000641950 531 ntBASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
TMEM88BA6NKF7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 CNN2P6-201ENST00000439038 900 ntBASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 RARRES2P4-201ENST00000514074 484 ntBASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM88BA6NKF7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
TMEM88BA6NKF7 MIR1224-201ENST00000408193 85 ntBASIC26■■□□□ 1.75
TMEM88BA6NKF7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM88BA6NKF7 AC142381.4-202ENST00000563973 229 ntBASIC26■■□□□ 1.75
TMEM88BA6NKF7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26■■□□□ 1.75
TMEM88BA6NKF7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
TMEM88BA6NKF7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM88BA6NKF7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26■■□□□ 1.75
TMEM88BA6NKF7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.99■■□□□ 1.75
TMEM88BA6NKF7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.98■■□□□ 1.75
TMEM88BA6NKF7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 LINC01529-204ENST00000636474 1715 ntBASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 KRT87P-202ENST00000534226 1464 ntBASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM88BA6NKF7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 ESRRAP1-201ENST00000400596 1257 ntBASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 MIPEPP3-201ENST00000412105 444 ntBASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms