Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.33■■□□□ 1.81
CLRN2A0PK11 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.33■■□□□ 1.81
CLRN2A0PK11 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.33■■□□□ 1.81
CLRN2A0PK11 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.33■■□□□ 1.81
CLRN2A0PK11 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.33■■□□□ 1.81
CLRN2A0PK11 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.33■■□□□ 1.81
CLRN2A0PK11 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CLRN2A0PK11 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CLRN2A0PK11 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.32■■□□□ 1.8
CLRN2A0PK11 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLRN2A0PK11 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.32■■□□□ 1.8
CLRN2A0PK11 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLRN2A0PK11 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLRN2A0PK11 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.31■■□□□ 1.8
CLRN2A0PK11 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.31■■□□□ 1.8
CLRN2A0PK11 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CLRN2A0PK11 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLRN2A0PK11 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.31■■□□□ 1.8
CLRN2A0PK11 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.31■■□□□ 1.8
CLRN2A0PK11 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLRN2A0PK11 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CLRN2A0PK11 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.3■■□□□ 1.8
CLRN2A0PK11 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLRN2A0PK11 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLRN2A0PK11 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CLRN2A0PK11 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CLRN2A0PK11 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.29■■□□□ 1.8
CLRN2A0PK11 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 AC020928.2-201ENST00000588717 2197 ntBASIC26.29■■□□□ 1.8
CLRN2A0PK11 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 SMUG1P1-201ENST00000590640 811 ntBASIC26.29■■□□□ 1.8
CLRN2A0PK11 BID-214ENST00000617586 542 ntTSL 5 BASIC26.29■■□□□ 1.8
CLRN2A0PK11 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLRN2A0PK11 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.29■■□□□ 1.8
CLRN2A0PK11 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.29■■□□□ 1.8
CLRN2A0PK11 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLRN2A0PK11 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CLRN2A0PK11 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.28■■□□□ 1.8
CLRN2A0PK11 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.28■■□□□ 1.8
CLRN2A0PK11 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.28■■□□□ 1.8
CLRN2A0PK11 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CLRN2A0PK11 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.28■■□□□ 1.8
CLRN2A0PK11 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CLRN2A0PK11 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CLRN2A0PK11 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.28■■□□□ 1.8
CLRN2A0PK11 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CLRN2A0PK11 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
CLRN2A0PK11 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CLRN2A0PK11 AC026185.1-201ENST00000445748 174 ntBASIC26.27■■□□□ 1.8
CLRN2A0PK11 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CLRN2A0PK11 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLRN2A0PK11 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.27■■□□□ 1.8
CLRN2A0PK11 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CLRN2A0PK11 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLRN2A0PK11 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.26■■□□□ 1.79
CLRN2A0PK11 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.26■■□□□ 1.79
CLRN2A0PK11 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLRN2A0PK11 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.26■■□□□ 1.79
CLRN2A0PK11 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.26■■□□□ 1.79
CLRN2A0PK11 LINC01124-201ENST00000409786 2117 ntBASIC26.26■■□□□ 1.79
CLRN2A0PK11 AC004812.2-201ENST00000611079 2094 ntBASIC26.26■■□□□ 1.79
CLRN2A0PK11 AL353803.4-201ENST00000565882 1934 ntBASIC26.26■■□□□ 1.79
CLRN2A0PK11 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CLRN2A0PK11 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.25■■□□□ 1.79
CLRN2A0PK11 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLRN2A0PK11 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CLRN2A0PK11 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CLRN2A0PK11 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLRN2A0PK11 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.25■■□□□ 1.79
CLRN2A0PK11 AC010141.3-201ENST00000456659 717 ntBASIC26.25■■□□□ 1.79
CLRN2A0PK11 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.25■■□□□ 1.79
CLRN2A0PK11 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLRN2A0PK11 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLRN2A0PK11 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLRN2A0PK11 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.24■■□□□ 1.79
CLRN2A0PK11 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.24■■□□□ 1.79
CLRN2A0PK11 AC104771.1-201ENST00000603335 964 ntBASIC26.24■■□□□ 1.79
CLRN2A0PK11 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLRN2A0PK11 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
CLRN2A0PK11 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLRN2A0PK11 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLRN2A0PK11 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLRN2A0PK11 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLRN2A0PK11 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLRN2A0PK11 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLRN2A0PK11 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.23■■□□□ 1.79
CLRN2A0PK11 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms