Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 DUX4L9-201ENST00000449051 1259 ntBASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV3S1A0A5B6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 AF131216.4-201ENST00000638924 1588 ntBASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV3S1A0A5B6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TCRBV3S1A0A5B6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 LINC01960-201ENST00000563759 1884 ntBASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV3S1A0A5B6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.58■□□□□ 0.89
TCRBV3S1A0A5B6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TCRBV3S1A0A5B6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 AC022616.5-201ENST00000518796 181 ntBASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV3S1A0A5B6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 Z98882.1-201ENST00000622160 2253 ntBASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 MIR7108-201ENST00000614319 87 ntBASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV3S1A0A5B6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TCRBV3S1A0A5B6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms