Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.38■□□□□ 0.85
TRBV11-1A0A0K0K1C0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AC068587.7-201ENST00000641602 218 ntBASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV11-1A0A0K0K1C0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MIR572-201ENST00000384983 95 ntBASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AC087239.1-201ENST00000622671 572 ntBASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV11-1A0A0K0K1C0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 RARRES2P6-201ENST00000567333 442 ntBASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 AL031602.1-201ENST00000633169 911 ntBASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TRBV11-1A0A0K0K1C0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV11-1A0A0K0K1C0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV11-1A0A0K0K1C0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV11-1A0A0K0K1C0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRBV11-1A0A0K0K1C0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms