Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV25A0A0B4J276 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV25A0A0B4J276 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAV25A0A0B4J276 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV25A0A0B4J276 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV25A0A0B4J276 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV25A0A0B4J276 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 AL031602.1-201ENST00000633169 911 ntBASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV25A0A0B4J276 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 AC010525.1-201ENST00000585559 441 ntBASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV25A0A0B4J276 AC019069.1-201ENST00000610008 1333 ntBASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 IGHV3-19-201ENST00000521488 291 ntBASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV25A0A0B4J276 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 AC010141.3-201ENST00000456659 717 ntBASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV25A0A0B4J276 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV25A0A0B4J276 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV25A0A0B4J276 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV25A0A0B4J276 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV25A0A0B4J276 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 AC105265.2-201ENST00000467189 838 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms