Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 AC026310.3-201ENST00000625186 2373 ntBASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 AC010980.1-201ENST00000587192 1142 ntBASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV5A0A0B4J249 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV5A0A0B4J249 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 FAM99A-202ENST00000538190 1989 ntBASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 AC004987.1-201ENST00000428627 508 ntBASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 NTF6A-201ENST00000591175 560 ntBASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV5A0A0B4J249 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV5A0A0B4J249 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV5A0A0B4J249 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV5A0A0B4J249 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRAV5A0A0B4J249 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAV5A0A0B4J249 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV5A0A0B4J249 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 AC010542.4-201ENST00000563151 1910 ntBASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV5A0A0B4J249 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 ATP5G2P3-201ENST00000429083 425 ntBASIC17■□□□□ 0.31
TRAV5A0A0B4J249 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms