Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 AC092068.2-201ENST00000590491 1708 ntBASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRGV5A0A0B4J1U4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 AC010141.3-201ENST00000456659 717 ntBASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 LINC02228-203ENST00000641970 1355 ntBASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRGV5A0A0B4J1U4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRGV5A0A0B4J1U4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRGV5A0A0B4J1U4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L2-201ENST00000561772 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L6-201ENST00000626483 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L1-201ENST00000627662 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L8-201ENST00000629013 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L3-201ENST00000630187 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L7-201ENST00000630678 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DUX4L5-201ENST00000630834 1275 ntBASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV5A0A0B4J1U4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 CCDC92B-201ENST00000575506 885 ntBASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.75■□□□□ 0.75
TRGV5A0A0B4J1U4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.74■□□□□ 0.75
TRGV5A0A0B4J1U4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 KRT18P5-201ENST00000436075 1291 ntBASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.73■□□□□ 0.75
TRGV5A0A0B4J1U4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms