Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV30A0A087WSZ9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV30A0A087WSZ9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV30A0A087WSZ9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 AC010997.5-201ENST00000609182 354 ntBASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV30A0A087WSZ9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 EP400NL-214ENST00000641289 2402 ntBASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV30A0A087WSZ9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 AC239859.2-201ENST00000444165 318 ntBASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV30A0A087WSZ9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 AC092053.2-201ENST00000640557 1818 ntBASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV30A0A087WSZ9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms