Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRAV6A0A075B6T7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 AL157400.5-201ENST00000507624 621 ntBASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV6A0A075B6T7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 AL391422.3-201ENST00000603791 2761 ntBASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV6A0A075B6T7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 AL162393.1-201ENST00000437852 946 ntBASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV6A0A075B6T7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 LINC01521-201ENST00000504184 1943 ntBASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV6A0A075B6T7 AC090877.2-201ENST00000558441 1738 ntBASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 AC087742.1-201ENST00000575880 1738 ntBASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 DUX4L11-201ENST00000611504 1267 ntBASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 DUX4L12-201ENST00000614593 1267 ntBASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 DUX4L14-201ENST00000621227 1267 ntBASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 AL022069.1-201ENST00000568025 1636 ntBASIC18.77■□□□□ 0.6
TRAV6A0A075B6T7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 ALDH1A3-203ENST00000557963 1670 ntBASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 SMPD5-203ENST00000639008 1464 ntBASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV6A0A075B6T7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV6A0A075B6T7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms