Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
CLK1P49759 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CLK1P49759 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 AC104590.1-202ENST00000558368 1921 ntBASIC12.42□□□□□ -0.42
CLK1P49759 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.42□□□□□ -0.42
CLK1P49759 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 TNKS-213ENST00000522110 2900 ntBASIC12.41□□□□□ -0.42
CLK1P49759 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CLK1P49759 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 AC074138.1-201ENST00000611182 1303 ntBASIC12.41□□□□□ -0.42
CLK1P49759 LPP-AS2-201ENST00000605573 2852 ntBASIC12.41□□□□□ -0.42
CLK1P49759 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 AC073210.1-201ENST00000414799 232 ntBASIC12.41□□□□□ -0.42
CLK1P49759 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 AC093300.1-201ENST00000510368 1201 ntBASIC12.41□□□□□ -0.42
CLK1P49759 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.41□□□□□ -0.42
CLK1P49759 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.41□□□□□ -0.42
CLK1P49759 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.41□□□□□ -0.42
CLK1P49759 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.41□□□□□ -0.42
CLK1P49759 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 AC009108.4-201ENST00000623284 2451 ntBASIC12.41□□□□□ -0.42
CLK1P49759 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 AL162615.1-201ENST00000429893 1653 ntBASIC12.41□□□□□ -0.42
CLK1P49759 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CLK1P49759 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.41□□□□□ -0.42
CLK1P49759 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC12.41□□□□□ -0.42
CLK1P49759 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLK1P49759 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CLK1P49759 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CLK1P49759 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 PCDHA9-201ENST00000378122 6900 ntBASIC12.4□□□□□ -0.42
CLK1P49759 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms