Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CSNK1DP48730 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CSNK1DP48730 AL645937.6-201ENST00000641122 3727 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 AKR1C6P-201ENST00000432950 983 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 AL773545.2-201ENST00000442149 472 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC13.01□□□□□ -0.33
CSNK1DP48730 FAM86KP-201ENST00000509817 987 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC13.01□□□□□ -0.33
CSNK1DP48730 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.01□□□□□ -0.33
CSNK1DP48730 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.01□□□□□ -0.33
CSNK1DP48730 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC13.01□□□□□ -0.33
CSNK1DP48730 AC009041.4-201ENST00000620075 638 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1DP48730 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1DP48730 BX005132.1-201ENST00000641403 1580 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 AL359183.1-201ENST00000623796 2132 ntBASIC13.01□□□□□ -0.33
CSNK1DP48730 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1DP48730 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CSNK1DP48730 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
CSNK1DP48730 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CSNK1DP48730 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1DP48730 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 NPTN-IT1-201ENST00000628401 2283 ntBASIC13□□□□□ -0.33
CSNK1DP48730 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 THEMIS3P-201ENST00000416112 1586 ntBASIC13□□□□□ -0.33
CSNK1DP48730 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 FAM90A22P-201ENST00000400142 1395 ntBASIC13□□□□□ -0.33
CSNK1DP48730 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 AC109326.1-201ENST00000624705 1321 ntBASIC13□□□□□ -0.33
CSNK1DP48730 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13□□□□□ -0.33
CSNK1DP48730 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 OARD1-214ENST00000486443 764 ntTSL 3 BASIC13□□□□□ -0.33
CSNK1DP48730 AC106872.8-201ENST00000507651 684 ntBASIC13□□□□□ -0.33
CSNK1DP48730 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 RNA5SP288-201ENST00000516075 93 ntBASIC13□□□□□ -0.33
CSNK1DP48730 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC13□□□□□ -0.33
CSNK1DP48730 MIR4254-201ENST00000581063 76 ntBASIC13□□□□□ -0.33
CSNK1DP48730 RN7SL121P-201ENST00000584223 273 ntBASIC13□□□□□ -0.33
CSNK1DP48730 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13□□□□□ -0.33
CSNK1DP48730 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CSNK1DP48730 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 AC245369.7-201ENST00000631386 350 ntBASIC13□□□□□ -0.33
CSNK1DP48730 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 PISD-203ENST00000397500 2194 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1DP48730 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1DP48730 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1DP48730 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 554.5 ms